Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
POLR2AP24928 COX6B1P3-201ENST00000312310 260 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.77□□□□□ -1.17
POLR2AP24928 MTND6P12-201ENST00000428247 522 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC7.77□□□□□ -1.17
POLR2AP24928 AC114982.2-201ENST00000461396 358 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.77□□□□□ -1.17
POLR2AP24928 ACTR6P1-201ENST00000514311 1104 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
POLR2AP24928 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
POLR2AP24928 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.77□□□□□ -1.17
POLR2AP24928 RN7SL404P-201ENST00000582421 281 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 AL591167.1-201ENST00000607321 456 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 AC018659.2-201ENST00000624690 715 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.77□□□□□ -1.17
POLR2AP24928 AC087392.3-202ENST00000358446 1754 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
POLR2AP24928 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
POLR2AP24928 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
POLR2AP24928 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.77□□□□□ -1.17
POLR2AP24928 TATDN2P3-201ENST00000452855 3665 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
POLR2AP24928 HCG18-244ENST00000602516 2890 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
POLR2AP24928 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.77□□□□□ -1.17
POLR2AP24928 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
POLR2AP24928 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
POLR2AP24928 MTND6P1-201ENST00000417434 424 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.77□□□□□ -1.17
POLR2AP24928 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.77□□□□□ -1.17
POLR2AP24928 AP000281.1-201ENST00000444036 316 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 UBFD1P1-201ENST00000473259 814 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
POLR2AP24928 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC7.77□□□□□ -1.17
POLR2AP24928 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.77□□□□□ -1.17
POLR2AP24928 AC016180.1-201ENST00000567945 403 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 AC090953.1-201ENST00000604305 1092 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 FAM27E2-201ENST00000619668 403 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 AC002044.3-201ENST00000623314 541 ntBASIC7.77□□□□□ -1.17
POLR2AP24928 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
POLR2AP24928 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
POLR2AP24928 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.76□□□□□ -1.17
POLR2AP24928 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.76□□□□□ -1.17
POLR2AP24928 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.76□□□□□ -1.17
POLR2AP24928 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
POLR2AP24928 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.76□□□□□ -1.17
POLR2AP24928 MAPK10-383ENST00000642032 3390 ntBASIC7.76□□□□□ -1.17
POLR2AP24928 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC7.76□□□□□ -1.17
POLR2AP24928 RN7SKP281-201ENST00000410472 352 ntBASIC7.76□□□□□ -1.17
POLR2AP24928 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.76□□□□□ -1.17
POLR2AP24928 SDR42E1P3-201ENST00000438345 502 ntBASIC7.76□□□□□ -1.17
POLR2AP24928 TVP23CP1-201ENST00000450317 639 ntBASIC7.76□□□□□ -1.17
POLR2AP24928 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.76□□□□□ -1.17
POLR2AP24928 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.76□□□□□ -1.17
POLR2AP24928 RNA5SP418-201ENST00000515951 117 ntBASIC7.76□□□□□ -1.17
POLR2AP24928 AC060775.1-201ENST00000518241 520 ntBASIC7.76□□□□□ -1.17
POLR2AP24928 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.76□□□□□ -1.17
POLR2AP24928 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
POLR2AP24928 AC068305.2-201ENST00000550567 1205 ntBASIC7.76□□□□□ -1.17
POLR2AP24928 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
POLR2AP24928 SNX18P10-201ENST00000625014 519 ntBASIC7.76□□□□□ -1.17
POLR2AP24928 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.76□□□□□ -1.17
POLR2AP24928 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.76□□□□□ -1.17
POLR2AP24928 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 AC073065.1-201ENST00000411678 2866 ntBASIC7.76□□□□□ -1.17
POLR2AP24928 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
POLR2AP24928 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
POLR2AP24928 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
POLR2AP24928 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
POLR2AP24928 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.75□□□□□ -1.17
POLR2AP24928 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
POLR2AP24928 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
POLR2AP24928 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
POLR2AP24928 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
POLR2AP24928 AP000568.1-201ENST00000282964 442 ntBASIC7.75□□□□□ -1.17
POLR2AP24928 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
POLR2AP24928 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
POLR2AP24928 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.75□□□□□ -1.17
POLR2AP24928 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
POLR2AP24928 GLRXP3-201ENST00000470810 321 ntBASIC7.75□□□□□ -1.17
POLR2AP24928 RPL12P30-201ENST00000488389 499 ntBASIC7.75□□□□□ -1.17
POLR2AP24928 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.75□□□□□ -1.17
POLR2AP24928 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.75□□□□□ -1.17
POLR2AP24928 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
POLR2AP24928 MTATP6P25-201ENST00000574491 261 ntBASIC7.75□□□□□ -1.17
POLR2AP24928 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.75□□□□□ -1.17
POLR2AP24928 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.75□□□□□ -1.17
POLR2AP24928 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.75□□□□□ -1.17
POLR2AP24928 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms