Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 OR10J9P-201ENST00000511932 987 ntBASIC6.79□□□□□ -1.32
CDH3P22223 SCARNA11.1-201ENST00000516918 132 ntBASIC6.79□□□□□ -1.32
CDH3P22223 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CDH3P22223 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CDH3P22223 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH3P22223 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH3P22223 OR4A1P-201ENST00000532342 920 ntBASIC6.79□□□□□ -1.32
CDH3P22223 AL135978.1-201ENST00000553618 1266 ntBASIC6.79□□□□□ -1.32
CDH3P22223 AL109628.1-201ENST00000556877 366 ntBASIC6.79□□□□□ -1.32
CDH3P22223 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH3P22223 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH3P22223 WDR45BP1-201ENST00000583470 1029 ntBASIC6.79□□□□□ -1.32
CDH3P22223 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH3P22223 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH3P22223 AC073263.3-201ENST00000624449 858 ntBASIC6.79□□□□□ -1.32
CDH3P22223 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH3P22223 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.79□□□□□ -1.32
CDH3P22223 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CDH3P22223 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH3P22223 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH3P22223 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH3P22223 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CDH3P22223 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH3P22223 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH3P22223 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH3P22223 AL161901.1-201ENST00000624954 3425 ntBASIC6.79□□□□□ -1.32
CDH3P22223 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CDH3P22223 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH3P22223 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH3P22223 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH3P22223 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH3P22223 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CDH3P22223 HSPD1P1-201ENST00000503199 1726 ntBASIC6.79□□□□□ -1.32
CDH3P22223 AC007114.2-201ENST00000576014 4281 ntBASIC6.79□□□□□ -1.32
CDH3P22223 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 AP003486.1-201ENST00000525716 3994 ntBASIC6.78□□□□□ -1.32
CDH3P22223 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 ZNF402P-201ENST00000404435 3100 ntBASIC6.78□□□□□ -1.32
CDH3P22223 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH3P22223 VN1R66P-201ENST00000412929 916 ntBASIC6.78□□□□□ -1.32
CDH3P22223 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH3P22223 CHCHD4P5-201ENST00000436684 427 ntBASIC6.78□□□□□ -1.32
CDH3P22223 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH3P22223 RPSAP41-201ENST00000439695 860 ntBASIC6.78□□□□□ -1.32
CDH3P22223 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH3P22223 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH3P22223 AC021820.1-201ENST00000525564 808 ntBASIC6.78□□□□□ -1.32
CDH3P22223 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH3P22223 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH3P22223 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.78□□□□□ -1.32
CDH3P22223 AC069240.2-201ENST00000550242 609 ntBASIC6.78□□□□□ -1.32
CDH3P22223 AC089984.3-201ENST00000552838 363 ntBASIC6.78□□□□□ -1.32
CDH3P22223 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.78□□□□□ -1.32
CDH3P22223 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 AC009955.2-201ENST00000597288 542 ntBASIC6.78□□□□□ -1.32
CDH3P22223 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.78□□□□□ -1.32
CDH3P22223 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 AL683813.2-201ENST00000605245 502 ntBASIC6.78□□□□□ -1.32
CDH3P22223 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH3P22223 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.78□□□□□ -1.32
CDH3P22223 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 TPTE2P2-201ENST00000403471 1466 ntBASIC6.78□□□□□ -1.32
CDH3P22223 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CDH3P22223 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
CDH3P22223 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
CDH3P22223 AC015871.3-201ENST00000618835 2261 ntBASIC6.78□□□□□ -1.32
CDH3P22223 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDH3P22223 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
CDH3P22223 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
CDH3P22223 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDH3P22223 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH3P22223 AL022323.4-201ENST00000623980 13120 ntBASIC6.77□□□□□ -1.33
CDH3P22223 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDH3P22223 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH3P22223 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH3P22223 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms