Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TVP23CP1-201ENST00000450317 639 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 PGBD4P1-201ENST00000473644 407 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 RPL37P23-201ENST00000492641 294 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 SNORA74.1-201ENST00000516320 180 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.92□□□□□ -1.3
HMGA1P17096 AC135983.3-201ENST00000528049 1226 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.92□□□□□ -1.3
HMGA1P17096 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGA1P17096 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGA1P17096 AL049840.5-201ENST00000602827 552 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 SNORD91A-202ENST00000609620 191 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 MIR7109-201ENST00000613748 65 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 CXADRP3-202ENST00000617265 1100 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AL354718.1-201ENST00000619764 589 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGA1P17096 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGA1P17096 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
HMGA1P17096 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HMGA1P17096 AC022613.3-201ENST00000560740 1346 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGA1P17096 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGA1P17096 ENO1P4-201ENST00000416471 1785 ntBASIC6.92□□□□□ -1.3
HMGA1P17096 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGA1P17096 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGA1P17096 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGA1P17096 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGA1P17096 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HMGA1P17096 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGA1P17096 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
HMGA1P17096 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HMGA1P17096 AL355974.1-201ENST00000618896 1708 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
HMGA1P17096 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HMGA1P17096 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGA1P17096 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGA1P17096 RNA5SP232-201ENST00000364144 119 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGA1P17096 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGA1P17096 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGA1P17096 GAPDHP34-201ENST00000432112 823 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGA1P17096 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGA1P17096 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGA1P17096 AC068491.1-201ENST00000449539 1241 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 RN7SL39P-201ENST00000462264 297 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGA1P17096 AC008429.2-201ENST00000523057 864 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGA1P17096 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGA1P17096 RPL3P13-201ENST00000550415 216 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGA1P17096 SYPL1P2-201ENST00000582878 727 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 AC005277.2-201ENST00000617898 390 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGA1P17096 AL121936.2-201ENST00000641935 662 ntBASIC6.91□□□□□ -1.3
HMGA1P17096 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGA1P17096 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGA1P17096 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGA1P17096 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGA1P17096 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGA1P17096 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGA1P17096 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGA1P17096 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.9□□□□□ -1.3
HMGA1P17096 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
HMGA1P17096 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.9□□□□□ -1.3
HMGA1P17096 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.9□□□□□ -1.3
HMGA1P17096 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
HMGA1P17096 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.9□□□□□ -1.3
HMGA1P17096 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 RNA5SP485-201ENST00000365053 119 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 MIR621-201ENST00000384919 96 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 RAB5CP1-201ENST00000395972 580 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 PSMA6P1-201ENST00000400275 741 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 RPL5P20-201ENST00000403848 896 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.9□□□□□ -1.3
HMGA1P17096 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGA1P17096 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms