Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPL17P17-201ENST00000419491 557 ntBASIC7.3□□□□□ -1.24
RB1P06400 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 AL590128.1-201ENST00000433407 286 ntBASIC7.3□□□□□ -1.24
RB1P06400 AC242426.1-201ENST00000435270 960 ntBASIC7.3□□□□□ -1.24
RB1P06400 SALL1P1-201ENST00000438101 3837 ntBASIC7.3□□□□□ -1.24
RB1P06400 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.3□□□□□ -1.24
RB1P06400 AC096922.1-201ENST00000461635 651 ntBASIC7.3□□□□□ -1.24
RB1P06400 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.3□□□□□ -1.24
RB1P06400 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.3□□□□□ -1.24
RB1P06400 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RB1P06400 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.3□□□□□ -1.24
RB1P06400 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.3□□□□□ -1.24
RB1P06400 AC125612.1-201ENST00000547580 377 ntBASIC7.3□□□□□ -1.24
RB1P06400 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.3□□□□□ -1.24
RB1P06400 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.3□□□□□ -1.24
RB1P06400 ANP32BP1-202ENST00000568553 737 ntBASIC7.3□□□□□ -1.24
RB1P06400 DYNLL1P1-201ENST00000595442 269 ntBASIC7.3□□□□□ -1.24
RB1P06400 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.3□□□□□ -1.24
RB1P06400 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.3□□□□□ -1.24
RB1P06400 BX323046.1-201ENST00000610145 535 ntBASIC7.3□□□□□ -1.24
RB1P06400 AL589743.6-201ENST00000611025 117 ntBASIC7.3□□□□□ -1.24
RB1P06400 AL359742.1-201ENST00000622497 540 ntBASIC7.3□□□□□ -1.24
RB1P06400 AL035425.4-201ENST00000624509 1063 ntBASIC7.3□□□□□ -1.24
RB1P06400 AC073488.2-201ENST00000631903 751 ntBASIC7.3□□□□□ -1.24
RB1P06400 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 AL354702.2-202ENST00000641481 890 ntBASIC7.3□□□□□ -1.24
RB1P06400 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.3□□□□□ -1.24
RB1P06400 ENO1P4-201ENST00000416471 1785 ntBASIC7.3□□□□□ -1.24
RB1P06400 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RB1P06400 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.3□□□□□ -1.24
RB1P06400 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.29□□□□□ -1.24
RB1P06400 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RB1P06400 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.29□□□□□ -1.24
RB1P06400 AC023818.2-201ENST00000623817 2304 ntBASIC7.29□□□□□ -1.24
RB1P06400 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.29□□□□□ -1.24
RB1P06400 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.29□□□□□ -1.24
RB1P06400 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RB1P06400 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.29□□□□□ -1.24
RB1P06400 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RB1P06400 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
RB1P06400 PRNCR1-201ENST00000635449 12727 ntBASIC7.29□□□□□ -1.24
RB1P06400 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RB1P06400 RNA5SP279-201ENST00000365513 117 ntBASIC7.29□□□□□ -1.24
RB1P06400 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.29□□□□□ -1.24
RB1P06400 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
RB1P06400 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.29□□□□□ -1.24
RB1P06400 RNA5SP198-201ENST00000410376 127 ntBASIC7.29□□□□□ -1.24
RB1P06400 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.29□□□□□ -1.24
RB1P06400 AL355994.1-201ENST00000424379 260 ntBASIC7.29□□□□□ -1.24
RB1P06400 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.29□□□□□ -1.24
RB1P06400 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.29□□□□□ -1.24
RB1P06400 AC092106.2-201ENST00000436597 487 ntBASIC7.29□□□□□ -1.24
RB1P06400 HMGN1P2-201ENST00000445197 310 ntBASIC7.29□□□□□ -1.24
RB1P06400 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RB1P06400 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.29□□□□□ -1.24
RB1P06400 AC018638.3-201ENST00000461273 132 ntBASIC7.29□□□□□ -1.24
RB1P06400 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.29□□□□□ -1.24
RB1P06400 UGT2A3P7-201ENST00000510485 734 ntBASIC7.29□□□□□ -1.24
RB1P06400 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RB1P06400 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.29□□□□□ -1.24
RB1P06400 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RB1P06400 AL109924.4-201ENST00000623089 670 ntBASIC7.29□□□□□ -1.24
RB1P06400 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RB1P06400 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RB1P06400 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RB1P06400 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
RB1P06400 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
RB1P06400 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.29□□□□□ -1.24
RB1P06400 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RB1P06400 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RB1P06400 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.29□□□□□ -1.24
RB1P06400 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.28□□□□□ -1.24
RB1P06400 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 AC009831.5-201ENST00000624000 3189 ntBASIC7.28□□□□□ -1.24
RB1P06400 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 AC087392.3-202ENST00000358446 1754 ntBASIC7.28□□□□□ -1.24
RB1P06400 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.28□□□□□ -1.24
RB1P06400 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
RB1P06400 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RB1P06400 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms