Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 VIM2P-201ENST00000402383 1294 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 THEM7P-201ENST00000419556 672 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 PPP2R2DP1-201ENST00000420526 637 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 OR6R1P-201ENST00000431838 940 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 BX119917.1-201ENST00000432517 502 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC092106.2-201ENST00000436597 487 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 RBMY2BP-202ENST00000451071 1156 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC133965.1-201ENST00000452984 354 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 RN7SL413P-201ENST00000482700 297 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 OR9A1P-202ENST00000484361 945 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC024405.1-201ENST00000532521 1042 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 MT1CP-201ENST00000567054 174 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC025283.1-201ENST00000572039 734 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 AC089999.3-201ENST00000622440 577 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
HLA-DOAP06340 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 MAPK10-357ENST00000641831 2858 ntBASIC7.99□□□□□ -1.13
HLA-DOAP06340 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HLA-DOAP06340 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 OR7A2P-201ENST00000304105 930 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 AC019070.1-201ENST00000415008 1024 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 AC239367.3-201ENST00000428996 814 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 DEFA11P-201ENST00000446470 261 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 RN7SL569P-201ENST00000494652 288 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 AC133552.4-201ENST00000576103 676 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 RN7SL270P-201ENST00000579643 281 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 AL359091.2-201ENST00000609303 556 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 AP000240.1-201ENST00000609910 452 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 AC116631.1-202ENST00000640984 683 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 PSMC1P4-201ENST00000515236 1327 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 AL096816.1-201ENST00000623300 2920 ntBASIC7.98□□□□□ -1.13
HLA-DOAP06340 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
HLA-DOAP06340 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HLA-DOAP06340 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
HLA-DOAP06340 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.97□□□□□ -1.13
HLA-DOAP06340 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-DOAP06340 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-DOAP06340 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-DOAP06340 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-DOAP06340 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-DOAP06340 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
HLA-DOAP06340 AL359396.1-201ENST00000623151 2376 ntBASIC7.97□□□□□ -1.13
HLA-DOAP06340 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-DOAP06340 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HLA-DOAP06340 RNA5SP65-201ENST00000363166 119 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms