Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AC068726.1-201ENST00000610993 341 ntBASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 MAPK10-344ENST00000641718 3746 ntBASIC9.66□□□□□ -0.86
SIN3AQ96ST3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AC104162.1-201ENST00000430831 2382 ntBASIC9.65□□□□□ -0.86
SIN3AQ96ST3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 SPATA31B1P-201ENST00000434692 4016 ntBASIC9.65□□□□□ -0.86
SIN3AQ96ST3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 RNA5SP85-201ENST00000365378 119 ntBASIC9.65□□□□□ -0.86
SIN3AQ96ST3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 RN7SKP296-201ENST00000411185 341 ntBASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 ASB8-207ENST00000536953 923 ntTSL 2 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AC106785.4-201ENST00000569492 412 ntBASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AP003115.1-201ENST00000569849 463 ntBASIC9.65□□□□□ -0.86
SIN3AQ96ST3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 AL049840.5-201ENST00000602827 552 ntBASIC9.65□□□□□ -0.86
SIN3AQ96ST3 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
SIN3AQ96ST3 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC9.65□□□□□ -0.87
SIN3AQ96ST3 AC020658.2-201ENST00000559030 4020 ntBASIC9.65□□□□□ -0.87
SIN3AQ96ST3 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SIN3AQ96ST3 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 MAK-202ENST00000354489 3941 ntTSL 5 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AC010894.1-201ENST00000313760 361 ntBASIC9.64□□□□□ -0.87
SIN3AQ96ST3 OR2M1P-201ENST00000318104 951 ntBASIC9.64□□□□□ -0.87
SIN3AQ96ST3 MIR541-201ENST00000401360 84 ntBASIC9.64□□□□□ -0.87
SIN3AQ96ST3 RNA5SP155-201ENST00000411154 129 ntBASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AL589794.1-201ENST00000424971 390 ntBASIC9.64□□□□□ -0.87
SIN3AQ96ST3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 DIMT1P1-201ENST00000603970 763 ntBASIC9.64□□□□□ -0.87
SIN3AQ96ST3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AC211486.4-201ENST00000621495 113 ntBASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SIN3AQ96ST3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SIN3AQ96ST3 UBTFL2-201ENST00000411859 1191 ntBASIC9.63□□□□□ -0.87
SIN3AQ96ST3 AC092106.2-201ENST00000436597 487 ntBASIC9.63□□□□□ -0.87
SIN3AQ96ST3 UBQLN1P1-207ENST00000441056 1169 ntBASIC9.63□□□□□ -0.87
SIN3AQ96ST3 SNRPBP1-201ENST00000443634 282 ntBASIC9.63□□□□□ -0.87
SIN3AQ96ST3 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms