Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL021997.1-201ENST00000605757 193 ntBASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 AC012510.1-201ENST00000607946 759 ntBASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 AC131235.4-201ENST00000609288 620 ntBASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 SNORD91A-202ENST00000609620 191 ntBASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 RNU6-1192P-201ENST00000612197 107 ntBASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 MIR6774-201ENST00000614651 70 ntBASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 RNU6-489P-201ENST00000618289 107 ntBASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 AC005832.2-201ENST00000538921 1430 ntBASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 AF131215.2-201ENST00000531549 1710 ntBASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SHKBP1Q8TBC3 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 SNORA73B-201ENST00000363217 204 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 RNU6-906P-201ENST00000384700 70 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 MIR138-2-201ENST00000384916 84 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 SNORA2C-201ENST00000408564 137 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 RN7SKP225-201ENST00000410405 352 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 PPIAP23-201ENST00000420099 497 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 ETF1P1-206ENST00000427296 984 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 E2F6P1-201ENST00000428850 745 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 RPL5P2-201ENST00000429598 854 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 E2F6P3-201ENST00000441743 743 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AL031736.1-201ENST00000449688 618 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 SNORA35.1-201ENST00000458908 128 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 RN7SL688P-201ENST00000471754 275 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AL928654.1-201ENST00000476081 354 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 RPL23AP73-201ENST00000492507 471 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 PFN1P8-201ENST00000497012 543 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 SUMO2P5-201ENST00000506790 245 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 OR5H7P-201ENST00000514084 930 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AP000435.1-201ENST00000528539 496 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 OR4C1P-201ENST00000530880 937 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 OR4A41P-201ENST00000533053 928 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AL096855.2-201ENST00000605785 369 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 AC007347.2-201ENST00000623044 180 ntBASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
SHKBP1Q8TBC3 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms