Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TCL6_3.1-201ENST00000619064 137 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AC018659.2-201ENST00000624690 715 ntBASIC7.53□□□□□ -1.2
TPM4P67936 MTCO1P25-201ENST00000414449 1799 ntBASIC7.53□□□□□ -1.2
TPM4P67936 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
TPM4P67936 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
TPM4P67936 AP002800.1-201ENST00000624982 2225 ntBASIC7.52□□□□□ -1.2
TPM4P67936 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
TPM4P67936 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 AC119674.1-213ENST00000641177 1386 ntBASIC7.52□□□□□ -1.21
TPM4P67936 PPIAP26-201ENST00000377951 522 ntBASIC7.52□□□□□ -1.21
TPM4P67936 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.52□□□□□ -1.21
TPM4P67936 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.52□□□□□ -1.21
TPM4P67936 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.52□□□□□ -1.21
TPM4P67936 AF274573.1-201ENST00000430535 494 ntBASIC7.52□□□□□ -1.21
TPM4P67936 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
TPM4P67936 MRPS21P3-201ENST00000436696 262 ntBASIC7.52□□□□□ -1.21
TPM4P67936 MYL6P3-201ENST00000436904 432 ntBASIC7.52□□□□□ -1.21
TPM4P67936 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.52□□□□□ -1.21
TPM4P67936 RPLP0P1-201ENST00000457002 361 ntBASIC7.52□□□□□ -1.21
TPM4P67936 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.52□□□□□ -1.21
TPM4P67936 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.52□□□□□ -1.21
TPM4P67936 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.52□□□□□ -1.21
TPM4P67936 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC7.52□□□□□ -1.21
TPM4P67936 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.52□□□□□ -1.21
TPM4P67936 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 AC007262.1-201ENST00000604099 321 ntBASIC7.52□□□□□ -1.21
TPM4P67936 RN7SL820P-201ENST00000616437 299 ntBASIC7.52□□□□□ -1.21
TPM4P67936 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.52□□□□□ -1.21
TPM4P67936 AC012254.5-201ENST00000623573 478 ntBASIC7.52□□□□□ -1.21
TPM4P67936 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 AC013268.3-201ENST00000262716 2324 ntBASIC7.52□□□□□ -1.21
TPM4P67936 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 VN2R1P-201ENST00000449668 1743 ntBASIC7.52□□□□□ -1.21
TPM4P67936 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
TPM4P67936 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TPM4P67936 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TPM4P67936 AC006511.3-201ENST00000624929 1783 ntBASIC7.51□□□□□ -1.21
TPM4P67936 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.51□□□□□ -1.21
TPM4P67936 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TPM4P67936 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TPM4P67936 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.51□□□□□ -1.21
TPM4P67936 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TPM4P67936 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
TPM4P67936 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.51□□□□□ -1.21
TPM4P67936 AL049697.3-201ENST00000406493 982 ntBASIC7.51□□□□□ -1.21
TPM4P67936 RPSAP59-201ENST00000421048 890 ntBASIC7.51□□□□□ -1.21
TPM4P67936 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC7.51□□□□□ -1.21
TPM4P67936 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.51□□□□□ -1.21
TPM4P67936 AL355355.1-201ENST00000442900 793 ntBASIC7.51□□□□□ -1.21
TPM4P67936 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
TPM4P67936 HIST1H2APS6-201ENST00000448609 364 ntBASIC7.51□□□□□ -1.21
TPM4P67936 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC7.51□□□□□ -1.21
TPM4P67936 NACAP6-201ENST00000509572 622 ntBASIC7.51□□□□□ -1.21
TPM4P67936 RN7SKP248-201ENST00000516278 305 ntBASIC7.51□□□□□ -1.21
TPM4P67936 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.51□□□□□ -1.21
TPM4P67936 AC100854.1-201ENST00000520351 341 ntBASIC7.51□□□□□ -1.21
TPM4P67936 AP003080.1-202ENST00000526526 915 ntBASIC7.51□□□□□ -1.21
TPM4P67936 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
TPM4P67936 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC7.51□□□□□ -1.21
TPM4P67936 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.51□□□□□ -1.21
TPM4P67936 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC7.51□□□□□ -1.21
TPM4P67936 CTSLP2-201ENST00000580501 394 ntBASIC7.51□□□□□ -1.21
TPM4P67936 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.51□□□□□ -1.21
TPM4P67936 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC7.51□□□□□ -1.21
TPM4P67936 AP001120.4-201ENST00000590231 108 ntBASIC7.51□□□□□ -1.21
TPM4P67936 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.51□□□□□ -1.21
TPM4P67936 AC012100.3-201ENST00000624738 575 ntBASIC7.51□□□□□ -1.21
TPM4P67936 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TPM4P67936 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.51□□□□□ -1.21
TPM4P67936 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TPM4P67936 ZNF402P-201ENST00000404435 3100 ntBASIC7.51□□□□□ -1.21
TPM4P67936 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
TPM4P67936 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TPM4P67936 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
TPM4P67936 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.5□□□□□ -1.21
TPM4P67936 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TPM4P67936 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
TPM4P67936 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.5□□□□□ -1.21
TPM4P67936 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.5□□□□□ -1.21
TPM4P67936 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
TPM4P67936 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.5□□□□□ -1.21
TPM4P67936 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.5□□□□□ -1.21
TPM4P67936 AC083906.1-201ENST00000509298 406 ntBASIC7.5□□□□□ -1.21
TPM4P67936 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC7.5□□□□□ -1.21
TPM4P67936 IGHV1-14-201ENST00000523391 241 ntBASIC7.5□□□□□ -1.21
TPM4P67936 OR52K3P-201ENST00000531655 943 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms