Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLRN1P58418 AL023806.3-201ENST00000638502 2704 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 SPATA31C1-201ENST00000420021 3895 ntBASIC6.48□□□□□ -1.37
CLRN1P58418 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.48□□□□□ -1.37
CLRN1P58418 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 DDX10P2-201ENST00000417796 2614 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 AL136981.1-203ENST00000451452 3844 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 KARSP2-201ENST00000415696 1639 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 THAP12P3-201ENST00000456373 2266 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.47□□□□□ -1.37
CLRN1P58418 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.47□□□□□ -1.37
CLRN1P58418 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 AC013262.1-201ENST00000426710 252 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AC092634.2-201ENST00000428146 1010 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AK3P5-201ENST00000432033 519 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AC245047.1-201ENST00000433276 873 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AL512661.1-201ENST00000434586 1253 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.47□□□□□ -1.37
CLRN1P58418 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.47□□□□□ -1.37
CLRN1P58418 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 OR9N1P-202ENST00000494289 481 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.47□□□□□ -1.37
CLRN1P58418 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.47□□□□□ -1.37
CLRN1P58418 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.47□□□□□ -1.37
CLRN1P58418 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 RNU5A-7P-201ENST00000515979 116 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AC120036.3-201ENST00000517826 292 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 NPM1P52-201ENST00000518264 846 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC6.47□□□□□ -1.37
CLRN1P58418 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
CLRN1P58418 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.47□□□□□ -1.37
CLRN1P58418 GLRXP2-201ENST00000555594 321 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.47□□□□□ -1.37
CLRN1P58418 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
CLRN1P58418 AC012181.2-201ENST00000570210 699 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.47□□□□□ -1.37
CLRN1P58418 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.47□□□□□ -1.37
CLRN1P58418 VN1R87P-201ENST00000596706 487 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CLRN1P58418 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 AL645927.2-201ENST00000618350 349 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 MIR8089-201ENST00000620165 82 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AC087072.2-201ENST00000621060 682 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 AL121985.2-201ENST00000621192 555 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 MTND2P41-201ENST00000637599 773 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 FADS2P1-201ENST00000611807 1446 ntBASIC6.47□□□□□ -1.37
CLRN1P58418 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.47□□□□□ -1.37
CLRN1P58418 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CLRN1P58418 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLRN1P58418 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CLRN1P58418 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CLRN1P58418 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CLRN1P58418 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.46□□□□□ -1.37
CLRN1P58418 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
CLRN1P58418 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
CLRN1P58418 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CLRN1P58418 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.46□□□□□ -1.38
CLRN1P58418 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CLRN1P58418 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CLRN1P58418 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.46□□□□□ -1.38
CLRN1P58418 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CLRN1P58418 RNU4-40P-201ENST00000364351 143 ntBASIC6.46□□□□□ -1.38
CLRN1P58418 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC6.46□□□□□ -1.38
CLRN1P58418 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
CLRN1P58418 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CLRN1P58418 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC6.46□□□□□ -1.38
CLRN1P58418 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.46□□□□□ -1.38
CLRN1P58418 AL050305.1-201ENST00000399993 1230 ntBASIC6.46□□□□□ -1.38
CLRN1P58418 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.46□□□□□ -1.38
CLRN1P58418 AC109638.1-201ENST00000417406 326 ntBASIC6.46□□□□□ -1.38
CLRN1P58418 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.46□□□□□ -1.38
CLRN1P58418 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CLRN1P58418 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.46□□□□□ -1.38
CLRN1P58418 RNU7-157P-201ENST00000459600 66 ntBASIC6.46□□□□□ -1.38
CLRN1P58418 RN7SL308P-201ENST00000464971 297 ntBASIC6.46□□□□□ -1.38
CLRN1P58418 RN7SL228P-201ENST00000470060 303 ntBASIC6.46□□□□□ -1.38
CLRN1P58418 RN7SL688P-201ENST00000471754 275 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms