Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.81□□□□□ -1.32
CDH3P22223 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.81□□□□□ -1.32
CDH3P22223 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDH3P22223 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CDH3P22223 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDH3P22223 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH3P22223 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH3P22223 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDH3P22223 AL596244.1-201ENST00000567068 3779 ntBASIC6.81□□□□□ -1.32
CDH3P22223 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.81□□□□□ -1.32
CDH3P22223 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CDH3P22223 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CDH3P22223 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH3P22223 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 AL512353.3-201ENST00000417517 1326 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AL117378.2-201ENST00000622916 1337 ntBASIC6.8□□□□□ -1.32
CDH3P22223 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 OR2A3P-202ENST00000641249 1776 ntBASIC6.8□□□□□ -1.32
CDH3P22223 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.8□□□□□ -1.32
CDH3P22223 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CDH3P22223 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 CCDC150P1-201ENST00000537123 2215 ntBASIC6.8□□□□□ -1.32
CDH3P22223 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CDH3P22223 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
CDH3P22223 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CDH3P22223 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 AC006511.2-201ENST00000388966 660 ntBASIC6.8□□□□□ -1.32
CDH3P22223 EEF1GP6-201ENST00000402309 905 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AL136100.1-201ENST00000407696 330 ntBASIC6.8□□□□□ -1.32
CDH3P22223 YWHAZP5-201ENST00000419975 730 ntBASIC6.8□□□□□ -1.32
CDH3P22223 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.8□□□□□ -1.32
CDH3P22223 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.8□□□□□ -1.32
CDH3P22223 BX005266.3-201ENST00000443013 1075 ntBASIC6.8□□□□□ -1.32
CDH3P22223 SDHCP3-201ENST00000445371 506 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AC133965.1-201ENST00000452984 354 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.8□□□□□ -1.32
CDH3P22223 AC079193.1-201ENST00000460497 588 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AC114982.2-201ENST00000461396 358 ntBASIC6.8□□□□□ -1.32
CDH3P22223 RPL23AP8-201ENST00000479812 475 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AC068522.1-201ENST00000482895 345 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.8□□□□□ -1.32
CDH3P22223 AC146944.3-201ENST00000509969 371 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.8□□□□□ -1.32
CDH3P22223 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.8□□□□□ -1.32
CDH3P22223 SSU72P6-201ENST00000532644 488 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.8□□□□□ -1.32
CDH3P22223 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.8□□□□□ -1.32
CDH3P22223 AC096708.2-201ENST00000577676 512 ntBASIC6.8□□□□□ -1.32
CDH3P22223 MIR3135A-201ENST00000578460 77 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.8□□□□□ -1.32
CDH3P22223 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH3P22223 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH3P22223 AC022001.1-201ENST00000605193 268 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AC063962.1-201ENST00000608199 521 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AC008626.2-201ENST00000624425 248 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AL162456.1-201ENST00000634535 2006 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AC140479.4-205ENST00000636339 820 ntBASIC6.8□□□□□ -1.32
CDH3P22223 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CDH3P22223 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
CDH3P22223 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.8□□□□□ -1.32
CDH3P22223 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH3P22223 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.8□□□□□ -1.32
CDH3P22223 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CDH3P22223 AL449283.1-201ENST00000602631 3403 ntBASIC6.8□□□□□ -1.32
CDH3P22223 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 AL355377.1-201ENST00000621125 1653 ntBASIC6.8□□□□□ -1.32
CDH3P22223 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 AC034229.2-201ENST00000566945 2508 ntBASIC6.8□□□□□ -1.32
CDH3P22223 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
CDH3P22223 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.8□□□□□ -1.32
CDH3P22223 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.79□□□□□ -1.32
CDH3P22223 SSXP3-201ENST00000442971 1300 ntBASIC6.79□□□□□ -1.32
CDH3P22223 AC007993.1-201ENST00000621298 2430 ntBASIC6.79□□□□□ -1.32
CDH3P22223 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH3P22223 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH3P22223 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH3P22223 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CDH3P22223 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH3P22223 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CDH3P22223 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CDH3P22223 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.79□□□□□ -1.32
CDH3P22223 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH3P22223 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CDH3P22223 VN1R6P-201ENST00000458417 907 ntBASIC6.79□□□□□ -1.32
CDH3P22223 RN7SL834P-201ENST00000461450 286 ntBASIC6.79□□□□□ -1.32
CDH3P22223 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms