Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC020658.2-201ENST00000559030 4020 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC018765.1-201ENST00000623357 3446 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 RNA5SP350-201ENST00000363298 111 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 SNORA38B-201ENST00000363524 131 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 RNA5SP442-201ENST00000365050 107 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC245452.2-201ENST00000435222 392 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 RPL4P2-201ENST00000447259 1282 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC133965.1-201ENST00000452984 354 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 PSMA6P2-201ENST00000457574 686 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 RN7SL382P-201ENST00000482631 282 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC127024.1-201ENST00000490847 418 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC093815.1-201ENST00000508637 280 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 IGHV3-57-201ENST00000520143 280 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 ACTG1P15-201ENST00000570019 1063 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC004232.1-201ENST00000571388 208 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC136944.5-201ENST00000573021 151 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 MIR4642-201ENST00000583943 82 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC083964.1-201ENST00000607549 630 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 MIR6723-201ENST00000621981 89 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC119674.1-217ENST00000641942 1086 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 TRIM60P14-201ENST00000513444 1419 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 RN7SKP63-201ENST00000363187 301 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 RNA5SP79-201ENST00000365193 109 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 RNU1-16P-201ENST00000365477 164 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 RNA5SP18-201ENST00000390935 121 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 HMGB3P1-201ENST00000393368 573 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 RN7SKP131-201ENST00000410698 301 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC020983.1-201ENST00000417063 543 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC092066.1-201ENST00000425131 317 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC097721.1-201ENST00000427150 1253 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 KIF3AP1-201ENST00000454055 611 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC022730.2-201ENST00000465359 452 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 RN7SL519P-201ENST00000497925 288 ntBASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC5.06□□□□□ -1.6
HLA-DQA1P01909 RN7SL835P-201ENST00000579920 262 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms