Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 MRPS17P1-201ENST00000596009 3130 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.17□□□□□ -1.42
ZIC3O60481 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ZIC3O60481 AL137918.1-201ENST00000624542 1922 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ZIC3O60481 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 AC004023.1-201ENST00000561473 1744 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 CCDC150P1-201ENST00000537123 2215 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 ZNF806-201ENST00000438300 1774 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 AC083799.1-201ENST00000366451 910 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ZIC3O60481 AC121334.1-201ENST00000396414 802 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ZIC3O60481 AC019070.1-201ENST00000415008 1024 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.17□□□□□ -1.42
ZIC3O60481 AHCYP8-201ENST00000425108 209 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 RPS10P21-201ENST00000430654 475 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 AC083855.1-201ENST00000440041 258 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.17□□□□□ -1.42
ZIC3O60481 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 AL121578.2-201ENST00000448797 447 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AL390728.3-201ENST00000452704 270 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 AL049829.1-201ENST00000465411 156 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 RN7SL216P-201ENST00000471607 298 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 RN7SL187P-201ENST00000495587 303 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.17□□□□□ -1.42
ZIC3O60481 AC010442.1-201ENST00000515583 816 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AC087752.2-201ENST00000521219 281 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.17□□□□□ -1.42
ZIC3O60481 AC140063.1-201ENST00000541343 259 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.17□□□□□ -1.42
ZIC3O60481 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.17□□□□□ -1.42
ZIC3O60481 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 AL591767.3-201ENST00000554632 525 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 CTSLP2-201ENST00000580501 394 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.17□□□□□ -1.42
ZIC3O60481 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 AL136370.1-201ENST00000608166 691 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.17□□□□□ -1.42
ZIC3O60481 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 AL391597.1-201ENST00000618707 694 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 AC005899.6-201ENST00000620729 297 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ZIC3O60481 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.17□□□□□ -1.42
ZIC3O60481 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.17□□□□□ -1.42
ZIC3O60481 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ZIC3O60481 ZNF840P-201ENST00000504759 1996 ntBASIC6.17□□□□□ -1.42
ZIC3O60481 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZIC3O60481 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ZIC3O60481 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ZIC3O60481 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ZIC3O60481 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ZIC3O60481 AC079248.1-201ENST00000427568 1546 ntBASIC6.16□□□□□ -1.42
ZIC3O60481 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
ZIC3O60481 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZIC3O60481 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ZIC3O60481 AL589826.1-201ENST00000340697 249 ntBASIC6.16□□□□□ -1.42
ZIC3O60481 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.16□□□□□ -1.42
ZIC3O60481 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
ZIC3O60481 AL353133.1-201ENST00000407695 401 ntBASIC6.16□□□□□ -1.42
ZIC3O60481 CYCSP17-201ENST00000407870 315 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms