Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 PTPN2P1-201ENST00000423212 1072 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 AC064862.5-201ENST00000440618 334 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 RPL12P49-201ENST00000441100 121 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 UOX-201ENST00000471089 899 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 PPP1R2P6-201ENST00000478565 588 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 AC131233.1-201ENST00000479200 955 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 RPL5P33-201ENST00000487833 905 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 IGLVV-66-201ENST00000523818 341 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 AP006587.5-201ENST00000532033 739 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 AL161912.3-201ENST00000605404 628 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPIPA3F8WFD2 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 AC132219.2-201ENST00000624416 2327 ntBASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 OR2AH1P-202ENST00000641232 2744 ntBASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 MIR191-201ENST00000384873 92 ntBASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 MIR1204-201ENST00000408388 67 ntBASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 RN7SKP91-201ENST00000410852 288 ntBASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 Z82198.3-201ENST00000421145 199 ntBASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 AC000089.1-201ENST00000424559 801 ntBASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 MORF4L1P5-201ENST00000433352 961 ntBASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 AC096632.2-201ENST00000438139 1239 ntBASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 RPL34P34-201ENST00000465389 354 ntBASIC6.28□□□□□ -1.4
NPIPA3F8WFD2 RN7SL390P-201ENST00000470634 284 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms