Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 AC009779.8-201ENST00000641684 4384 ntBASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DRB4X5D2U9 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 CLCA3P-203ENST00000490028 2781 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 OGFOD1P1-201ENST00000447552 1592 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 OR11H13P-201ENST00000359695 979 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AL359715.1-201ENST00000404330 555 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 MTND6P1-201ENST00000417434 424 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 GAPDHP69-201ENST00000425504 1008 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 CHCHD3P1-201ENST00000425516 676 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 LSM3P3-201ENST00000436601 306 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 MRPS21P3-201ENST00000436696 262 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 GAPDHP53-201ENST00000458397 924 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC010409.2-201ENST00000505780 478 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 IGLVV-66-201ENST00000523818 341 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC084337.1-201ENST00000524809 686 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 OR9L1P-201ENST00000529493 933 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 OR4A21P-201ENST00000532759 944 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 PDCL3P1-201ENST00000534575 734 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC087575.1-201ENST00000585087 229 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC007255.2-201ENST00000604053 631 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC024085.1-201ENST00000604299 432 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AP003486.1-201ENST00000525716 3994 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 AC129502.1-201ENST00000623261 1654 ntBASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DRB4X5D2U9 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 CCAT2-201ENST00000630920 1752 ntBASIC5.17□□□□□ -1.58
HLA-DRB4X5D2U9 DOCK11P1-201ENST00000553480 5932 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms