Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RPS12P20-201ENST00000464109 380 ntBASIC8.22□□□□□ -1.09
UPF2Q9HAU5 NACAP6-201ENST00000509572 622 ntBASIC8.22□□□□□ -1.09
UPF2Q9HAU5 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 AC113361.1-201ENST00000606683 543 ntBASIC8.22□□□□□ -1.09
UPF2Q9HAU5 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC8.22□□□□□ -1.09
UPF2Q9HAU5 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 ATP5BP1-201ENST00000411980 1574 ntBASIC8.22□□□□□ -1.09
UPF2Q9HAU5 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 DNM1P47-203ENST00000571780 12667 ntBASIC8.21□□□□□ -1.09
UPF2Q9HAU5 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.21□□□□□ -1.09
UPF2Q9HAU5 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
UPF2Q9HAU5 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC8.21□□□□□ -1.09
UPF2Q9HAU5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
UPF2Q9HAU5 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
UPF2Q9HAU5 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
UPF2Q9HAU5 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
UPF2Q9HAU5 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 ALDH7A1P4-201ENST00000412255 178 ntBASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 MYL6P3-201ENST00000436904 432 ntBASIC8.21□□□□□ -1.1
UPF2Q9HAU5 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AC083906.1-201ENST00000509298 406 ntBASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AC100854.1-201ENST00000520351 341 ntBASIC8.21□□□□□ -1.1
UPF2Q9HAU5 OXR1-212ENST00000521592 993 ntTSL 5 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 OR52K3P-201ENST00000531655 943 ntBASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AL049869.4-201ENST00000555669 178 ntBASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AP001120.4-201ENST00000590231 108 ntBASIC8.21□□□□□ -1.1
UPF2Q9HAU5 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AP000577.1-201ENST00000624366 878 ntBASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 JAML-213ENST00000640745 951 ntTSL 5 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 AC119674.1-213ENST00000641177 1386 ntBASIC8.21□□□□□ -1.1
UPF2Q9HAU5 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.21□□□□□ -1.1
UPF2Q9HAU5 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AC005332.9-201ENST00000620266 2921 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AL669831.5-218ENST00000591702 1873 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AL049697.3-201ENST00000406493 982 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 NMNAT1P3-201ENST00000457517 888 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 TAAR3P-202ENST00000481759 1025 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AC016559.1-201ENST00000511420 199 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AP003084.1-201ENST00000524828 742 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 OR7E161P-201ENST00000533722 967 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 RN7SL270P-201ENST00000579643 281 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AC243830.3-201ENST00000616810 376 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 PART1_3.1-201ENST00000619680 131 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 AC022613.3-201ENST00000560740 1346 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms