Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PABPC1P1-201ENST00000506347 591 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 AC090115.2-201ENST00000548060 883 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 OSTC-205ENST00000613215 876 ntTSL 2 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 AL596275.2-203ENST00000641951 371 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 AC245060.6-201ENST00000624350 8420 ntBASIC8.13□□□□□ -1.11
SNED1Q8TER0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNED1Q8TER0 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.13□□□□□ -1.11
SNED1Q8TER0 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 LCN1P2-201ENST00000372030 223 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AL139805.1-201ENST00000407837 289 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC244452.1-201ENST00000413798 141 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AL929472.1-201ENST00000417484 429 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 SULT1D1P-201ENST00000458020 882 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 RPS4XP23-201ENST00000487801 237 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 AL138895.2-201ENST00000603019 178 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC067773.1-201ENST00000603284 1094 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC091167.5-201ENST00000605689 894 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 AL096712.1-201ENST00000614561 159 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 RN7SKP23-201ENST00000625159 4301 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 AL590762.1-201ENST00000391782 432 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 CYCSP17-201ENST00000407870 315 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 CDY17P-201ENST00000414121 1282 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC066692.1-201ENST00000421721 457 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC011411.1-201ENST00000509592 876 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC115837.1-201ENST00000517662 1001 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 CYCSP25-201ENST00000525280 316 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 AL162632.2-201ENST00000553933 399 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 Six3os1_4.1-201ENST00000615706 324 ntBASIC8.12□□□□□ -1.11
SNED1Q8TER0 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SNED1Q8TER0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
SNED1Q8TER0 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 VN2R1P-201ENST00000449668 1743 ntBASIC8.11□□□□□ -1.11
SNED1Q8TER0 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms