Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 FGG-204ENST00000405164 1539 ntTSL 5 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RNA5SP251-201ENST00000410614 137 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC002367.1-201ENST00000416765 405 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RPSAP62-201ENST00000432596 833 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 LDHAP2-201ENST00000437325 985 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC009237.4-201ENST00000441078 238 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RN7SL508P-201ENST00000464472 303 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RN7SL392P-201ENST00000473024 299 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC107956.2-201ENST00000496042 454 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC023794.3-204ENST00000510754 236 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC122713.1-201ENST00000518368 1015 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AP003041.2-201ENST00000525666 1180 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AP006587.5-201ENST00000532033 739 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 EGLN3P1-201ENST00000541727 720 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RN7SL199P-201ENST00000578752 281 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RN7SL656P-201ENST00000579044 281 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RN7SL786P-201ENST00000579130 298 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RN7SL404P-201ENST00000582421 281 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC093909.6-201ENST00000624757 775 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AL356361.1-201ENST00000400943 1459 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 AC129502.1-201ENST00000623261 1654 ntBASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BEST4Q8NFU0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC015799.1-201ENST00000622996 3122 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 MIR152-201ENST00000385212 87 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC007568.1-201ENST00000422912 471 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 RPS10P3-201ENST00000439253 494 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AL161626.1-201ENST00000441480 490 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AL355355.1-201ENST00000442900 793 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AL591379.2-201ENST00000450223 397 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC002075.1-201ENST00000457396 676 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC008026.1-201ENST00000460492 447 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 PABPC1P10-201ENST00000464731 381 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC009108.1-201ENST00000473913 796 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 SCARNA6-201ENST00000515982 265 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AP001804.1-201ENST00000526868 919 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC018523.1-201ENST00000534211 512 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC079866.1-201ENST00000534985 1220 ntBASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC5.8□□□□□ -1.48
BEST4Q8NFU0 AC009237.12-201ENST00000604755 742 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms