Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RNA5SP206-201ENST00000516703 121 ntBASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 NATP-201ENST00000523491 878 ntBASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 AC036111.2-201ENST00000533247 901 ntBASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 AP005431.1-201ENST00000618479 319 ntBASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 DYNC1I2P1-201ENST00000435916 1838 ntBASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 AC007406.5-201ENST00000570140 3170 ntBASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 LYARP1-201ENST00000436977 1501 ntBASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC9.9□□□□□ -0.82
CDC42BPAQ5VT25 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 TANK-203ENST00000402568 878 ntTSL 5 BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 CDY8P-201ENST00000428380 1279 ntBASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 CDY20P-201ENST00000447528 1279 ntBASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 VPS25P1-201ENST00000455691 508 ntBASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 AC018638.3-201ENST00000461273 132 ntBASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 AC007998.1-201ENST00000474156 672 ntBASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 AC073046.2-201ENST00000604756 527 ntBASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 AC183089.2-201ENST00000637931 916 ntBASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 MTCO1P25-201ENST00000414449 1799 ntBASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 AC087501.5-201ENST00000607496 2374 ntBASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
CDC42BPAQ5VT25 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 SMG1P5-202ENST00000529428 4219 ntBASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 SMG1P2-201ENST00000566127 4221 ntBASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 SLC9B1P1-201ENST00000331172 1337 ntBASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 RNA5SP273-201ENST00000362484 113 ntBASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 AL391987.1-201ENST00000441025 200 ntBASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 AC073109.1-201ENST00000445066 978 ntBASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 OR1N1-202ENST00000619659 939 ntBASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 MIR6886-201ENST00000619864 61 ntBASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CDC42BPAQ5VT25 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms