Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC091982.1-202ENST00000473923 343 ntBASIC7.55□□□□□ -1.2
TPM4P67936 AC117392.1-201ENST00000487061 596 ntBASIC7.55□□□□□ -1.2
TPM4P67936 AC079594.1-201ENST00000489757 331 ntBASIC7.55□□□□□ -1.2
TPM4P67936 RN7SL187P-201ENST00000495587 303 ntBASIC7.55□□□□□ -1.2
TPM4P67936 OR5M6P-201ENST00000530227 937 ntBASIC7.55□□□□□ -1.2
TPM4P67936 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.55□□□□□ -1.2
TPM4P67936 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.55□□□□□ -1.2
TPM4P67936 RN7SL664P-201ENST00000584239 305 ntBASIC7.55□□□□□ -1.2
TPM4P67936 AL078623.1-201ENST00000602702 907 ntBASIC7.55□□□□□ -1.2
TPM4P67936 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.55□□□□□ -1.2
TPM4P67936 AC012653.2-201ENST00000621880 420 ntBASIC7.55□□□□□ -1.2
TPM4P67936 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.55□□□□□ -1.2
TPM4P67936 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.55□□□□□ -1.2
TPM4P67936 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.55□□□□□ -1.2
TPM4P67936 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.55□□□□□ -1.2
TPM4P67936 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
TPM4P67936 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM4P67936 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
TPM4P67936 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.55□□□□□ -1.2
TPM4P67936 AP004289.1-201ENST00000436307 2205 ntBASIC7.55□□□□□ -1.2
TPM4P67936 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM4P67936 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.55□□□□□ -1.2
TPM4P67936 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 AC096992.2-201ENST00000609553 1684 ntBASIC7.54□□□□□ -1.2
TPM4P67936 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.54□□□□□ -1.2
TPM4P67936 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 AP003170.5-201ENST00000397185 335 ntBASIC7.54□□□□□ -1.2
TPM4P67936 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 AC009237.9-201ENST00000414800 347 ntBASIC7.54□□□□□ -1.2
TPM4P67936 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC7.54□□□□□ -1.2
TPM4P67936 CHCHD3P1-201ENST00000425516 676 ntBASIC7.54□□□□□ -1.2
TPM4P67936 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC7.54□□□□□ -1.2
TPM4P67936 AC016489.1-201ENST00000461109 375 ntBASIC7.54□□□□□ -1.2
TPM4P67936 RPS2P25-201ENST00000467247 580 ntBASIC7.54□□□□□ -1.2
TPM4P67936 RN7SL379P-201ENST00000479912 293 ntBASIC7.54□□□□□ -1.2
TPM4P67936 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC7.54□□□□□ -1.2
TPM4P67936 RNA5SP518-201ENST00000515957 119 ntBASIC7.54□□□□□ -1.2
TPM4P67936 IGHV3-57-201ENST00000520143 280 ntBASIC7.54□□□□□ -1.2
TPM4P67936 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
TPM4P67936 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC7.54□□□□□ -1.2
TPM4P67936 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.54□□□□□ -1.2
TPM4P67936 AC020914.7-201ENST00000594477 545 ntBASIC7.54□□□□□ -1.2
TPM4P67936 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
TPM4P67936 AC004908.1-201ENST00000606572 541 ntBASIC7.54□□□□□ -1.2
TPM4P67936 RN7SL126P-201ENST00000616400 299 ntBASIC7.54□□□□□ -1.2
TPM4P67936 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.54□□□□□ -1.2
TPM4P67936 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.54□□□□□ -1.2
TPM4P67936 AC004836.1-201ENST00000623032 634 ntBASIC7.54□□□□□ -1.2
TPM4P67936 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.54□□□□□ -1.2
TPM4P67936 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.2
TPM4P67936 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
TPM4P67936 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TPM4P67936 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TPM4P67936 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TPM4P67936 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
TPM4P67936 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
TPM4P67936 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TPM4P67936 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TPM4P67936 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
TPM4P67936 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TPM4P67936 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TPM4P67936 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
TPM4P67936 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.53□□□□□ -1.2
TPM4P67936 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
TPM4P67936 OR11H13P-201ENST00000359695 979 ntBASIC7.53□□□□□ -1.2
TPM4P67936 RN7SKP118-201ENST00000364331 330 ntBASIC7.53□□□□□ -1.2
TPM4P67936 SNORA55-201ENST00000364587 135 ntBASIC7.53□□□□□ -1.2
TPM4P67936 RN7SKP55-201ENST00000364888 307 ntBASIC7.53□□□□□ -1.2
TPM4P67936 MIR614-201ENST00000385082 90 ntBASIC7.53□□□□□ -1.2
TPM4P67936 RPL7P58-201ENST00000402913 758 ntBASIC7.53□□□□□ -1.2
TPM4P67936 SLC25A5P7-201ENST00000406156 896 ntBASIC7.53□□□□□ -1.2
TPM4P67936 CYCSP17-201ENST00000407870 315 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC7.53□□□□□ -1.2
TPM4P67936 GAPDHP55-201ENST00000423136 803 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AC239367.3-201ENST00000428996 814 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.53□□□□□ -1.2
TPM4P67936 BMP6P1-201ENST00000431230 679 ntBASIC7.53□□□□□ -1.2
TPM4P67936 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.53□□□□□ -1.2
TPM4P67936 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TPM4P67936 MGAT2P1-201ENST00000449718 797 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.53□□□□□ -1.2
TPM4P67936 AC115223.1-201ENST00000466377 870 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AC083806.1-201ENST00000468934 316 ntBASIC7.53□□□□□ -1.2
TPM4P67936 CHCHD2P7-201ENST00000508008 452 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.53□□□□□ -1.2
TPM4P67936 SNORA81.2-201ENST00000516868 170 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.53□□□□□ -1.2
TPM4P67936 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.53□□□□□ -1.2
TPM4P67936 AC090971.3-201ENST00000557871 1041 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AC061975.3-201ENST00000583209 244 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AL139123.1-201ENST00000612008 430 ntBASIC7.53□□□□□ -1.2
TPM4P67936 AC005393.1-201ENST00000617916 584 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms