Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SSR1P43307 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
SSR1P43307 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.36□□□□□ -1.23
SSR1P43307 CAP1P2-201ENST00000417455 1409 ntBASIC7.36□□□□□ -1.23
SSR1P43307 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SSR1P43307 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 AL161912.4-201ENST00000623889 2468 ntBASIC7.36□□□□□ -1.23
SSR1P43307 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.36□□□□□ -1.23
SSR1P43307 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 FAUP2-201ENST00000394301 401 ntBASIC7.36□□□□□ -1.23
SSR1P43307 REREP1Y-201ENST00000422655 198 ntBASIC7.36□□□□□ -1.23
SSR1P43307 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.36□□□□□ -1.23
SSR1P43307 REREP2Y-201ENST00000439103 200 ntBASIC7.36□□□□□ -1.23
SSR1P43307 AL139135.2-201ENST00000445040 433 ntBASIC7.36□□□□□ -1.23
SSR1P43307 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.36□□□□□ -1.23
SSR1P43307 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.36□□□□□ -1.23
SSR1P43307 NACAP6-201ENST00000509572 622 ntBASIC7.36□□□□□ -1.23
SSR1P43307 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC7.36□□□□□ -1.23
SSR1P43307 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.36□□□□□ -1.23
SSR1P43307 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC7.36□□□□□ -1.23
SSR1P43307 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.36□□□□□ -1.23
SSR1P43307 AL589765.5-201ENST00000596133 515 ntBASIC7.36□□□□□ -1.23
SSR1P43307 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.36□□□□□ -1.23
SSR1P43307 AC013731.1-201ENST00000604340 883 ntBASIC7.36□□□□□ -1.23
SSR1P43307 MIR6807-201ENST00000621968 92 ntBASIC7.36□□□□□ -1.23
SSR1P43307 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.36□□□□□ -1.23
SSR1P43307 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.36□□□□□ -1.23
SSR1P43307 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
SSR1P43307 OGFOD1P1-201ENST00000447552 1592 ntBASIC7.36□□□□□ -1.23
SSR1P43307 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 AL132656.3-201ENST00000606384 1595 ntBASIC7.36□□□□□ -1.23
SSR1P43307 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SSR1P43307 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SSR1P43307 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SSR1P43307 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SSR1P43307 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SSR1P43307 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.35□□□□□ -1.23
SSR1P43307 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.35□□□□□ -1.23
SSR1P43307 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.35□□□□□ -1.23
SSR1P43307 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.35□□□□□ -1.23
SSR1P43307 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
SSR1P43307 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 RNU1-24P-201ENST00000364285 165 ntBASIC7.35□□□□□ -1.23
SSR1P43307 AL451142.1-201ENST00000375867 775 ntBASIC7.35□□□□□ -1.23
SSR1P43307 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 MIR152-201ENST00000385212 87 ntBASIC7.35□□□□□ -1.23
SSR1P43307 RPL9P21-201ENST00000392269 505 ntBASIC7.35□□□□□ -1.23
SSR1P43307 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.35□□□□□ -1.23
SSR1P43307 MTND6P1-201ENST00000417434 424 ntBASIC7.35□□□□□ -1.23
SSR1P43307 DPPA2P2-201ENST00000418220 897 ntBASIC7.35□□□□□ -1.23
SSR1P43307 RPSAP1-201ENST00000421328 880 ntBASIC7.35□□□□□ -1.23
SSR1P43307 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC7.35□□□□□ -1.23
SSR1P43307 OR51P1P-201ENST00000447547 942 ntBASIC7.35□□□□□ -1.23
SSR1P43307 WBP1LP1-201ENST00000460451 896 ntBASIC7.35□□□□□ -1.23
SSR1P43307 AL591122.1-201ENST00000487348 492 ntBASIC7.35□□□□□ -1.23
SSR1P43307 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.35□□□□□ -1.23
SSR1P43307 RN7SL775P-201ENST00000498361 336 ntBASIC7.35□□□□□ -1.23
SSR1P43307 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.35□□□□□ -1.23
SSR1P43307 SCARNA6-201ENST00000515982 265 ntBASIC7.35□□□□□ -1.23
SSR1P43307 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.35□□□□□ -1.23
SSR1P43307 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.35□□□□□ -1.23
SSR1P43307 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.35□□□□□ -1.23
SSR1P43307 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.35□□□□□ -1.23
SSR1P43307 OR4A21P-201ENST00000532759 944 ntBASIC7.35□□□□□ -1.23
SSR1P43307 AC079866.1-201ENST00000534985 1220 ntBASIC7.35□□□□□ -1.23
SSR1P43307 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.35□□□□□ -1.23
SSR1P43307 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.35□□□□□ -1.23
SSR1P43307 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC7.35□□□□□ -1.23
SSR1P43307 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.35□□□□□ -1.23
SSR1P43307 AC016839.1-201ENST00000578162 867 ntBASIC7.35□□□□□ -1.23
SSR1P43307 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.35□□□□□ -1.23
SSR1P43307 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC7.35□□□□□ -1.23
SSR1P43307 AC113361.1-201ENST00000606683 543 ntBASIC7.35□□□□□ -1.23
SSR1P43307 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.35□□□□□ -1.23
SSR1P43307 AC016542.3-201ENST00000623520 619 ntBASIC7.35□□□□□ -1.23
SSR1P43307 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC7.35□□□□□ -1.23
SSR1P43307 OR5AU1-204ENST00000641822 1197 ntBASIC7.35□□□□□ -1.23
SSR1P43307 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
SSR1P43307 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.35□□□□□ -1.23
SSR1P43307 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SSR1P43307 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms