Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NCK1P16333 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
NCK1P16333 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
NCK1P16333 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.34□□□□□ -1.4
NCK1P16333 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
NCK1P16333 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
NCK1P16333 MTCO1P25-201ENST00000414449 1799 ntBASIC6.34□□□□□ -1.4
NCK1P16333 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
NCK1P16333 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.33□□□□□ -1.4
NCK1P16333 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.33□□□□□ -1.4
NCK1P16333 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.33□□□□□ -1.4
NCK1P16333 MAPK10-270ENST00000641102 3538 ntBASIC6.33□□□□□ -1.4
NCK1P16333 AC090774.4-201ENST00000578888 1372 ntBASIC6.33□□□□□ -1.4
NCK1P16333 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.33□□□□□ -1.4
NCK1P16333 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.33□□□□□ -1.4
NCK1P16333 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 AL512329.1-201ENST00000404600 1592 ntBASIC6.33□□□□□ -1.4
NCK1P16333 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
NCK1P16333 AL451142.1-201ENST00000375867 775 ntBASIC6.33□□□□□ -1.4
NCK1P16333 FAUP2-201ENST00000394301 401 ntBASIC6.33□□□□□ -1.4
NCK1P16333 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
NCK1P16333 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.33□□□□□ -1.4
NCK1P16333 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.33□□□□□ -1.4
NCK1P16333 KRT18P53-201ENST00000431919 117 ntBASIC6.33□□□□□ -1.4
NCK1P16333 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
NCK1P16333 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.33□□□□□ -1.4
NCK1P16333 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.33□□□□□ -1.4
NCK1P16333 MEF2AP1-201ENST00000454867 863 ntBASIC6.33□□□□□ -1.4
NCK1P16333 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.33□□□□□ -1.4
NCK1P16333 RN7SL282P-201ENST00000479676 297 ntBASIC6.33□□□□□ -1.4
NCK1P16333 AC117392.1-201ENST00000487061 596 ntBASIC6.33□□□□□ -1.4
NCK1P16333 RPL23AP80-201ENST00000495605 424 ntBASIC6.33□□□□□ -1.4
NCK1P16333 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.33□□□□□ -1.4
NCK1P16333 NACAP6-201ENST00000509572 622 ntBASIC6.33□□□□□ -1.4
NCK1P16333 RNA5SP518-201ENST00000515957 119 ntBASIC6.33□□□□□ -1.4
NCK1P16333 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.33□□□□□ -1.4
NCK1P16333 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NCK1P16333 OR52K3P-201ENST00000531655 943 ntBASIC6.33□□□□□ -1.4
NCK1P16333 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC6.33□□□□□ -1.4
NCK1P16333 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.33□□□□□ -1.4
NCK1P16333 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.33□□□□□ -1.4
NCK1P16333 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.33□□□□□ -1.4
NCK1P16333 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC6.33□□□□□ -1.4
NCK1P16333 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC6.33□□□□□ -1.4
NCK1P16333 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.33□□□□□ -1.4
NCK1P16333 AC006116.6-201ENST00000593258 1103 ntBASIC6.33□□□□□ -1.4
NCK1P16333 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC6.33□□□□□ -1.4
NCK1P16333 AL161420.1-201ENST00000619393 264 ntBASIC6.33□□□□□ -1.4
NCK1P16333 AC087072.2-201ENST00000621060 682 ntBASIC6.33□□□□□ -1.4
NCK1P16333 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.33□□□□□ -1.4
NCK1P16333 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.33□□□□□ -1.4
NCK1P16333 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.33□□□□□ -1.4
NCK1P16333 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
NCK1P16333 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.33□□□□□ -1.4
NCK1P16333 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.33□□□□□ -1.4
NCK1P16333 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.33□□□□□ -1.4
NCK1P16333 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.33□□□□□ -1.4
NCK1P16333 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NCK1P16333 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NCK1P16333 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NCK1P16333 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
NCK1P16333 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NCK1P16333 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.32□□□□□ -1.4
NCK1P16333 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NCK1P16333 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.32□□□□□ -1.4
NCK1P16333 ATP5BP1-201ENST00000411980 1574 ntBASIC6.32□□□□□ -1.4
NCK1P16333 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
NCK1P16333 AC006511.3-201ENST00000624929 1783 ntBASIC6.32□□□□□ -1.4
NCK1P16333 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NCK1P16333 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NCK1P16333 FAM32BP-201ENST00000344033 333 ntBASIC6.32□□□□□ -1.4
NCK1P16333 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NCK1P16333 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.32□□□□□ -1.4
NCK1P16333 CYCSP17-201ENST00000407870 315 ntBASIC6.32□□□□□ -1.4
NCK1P16333 MTND4LP17-201ENST00000414607 293 ntBASIC6.32□□□□□ -1.4
NCK1P16333 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.32□□□□□ -1.4
NCK1P16333 PPIL1P1-201ENST00000423936 499 ntBASIC6.32□□□□□ -1.4
NCK1P16333 AC239367.3-201ENST00000428996 814 ntBASIC6.32□□□□□ -1.4
NCK1P16333 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.32□□□□□ -1.4
NCK1P16333 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.32□□□□□ -1.4
NCK1P16333 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
NCK1P16333 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NCK1P16333 RN7SL308P-201ENST00000464971 297 ntBASIC6.32□□□□□ -1.4
NCK1P16333 AC092824.1-201ENST00000483524 576 ntBASIC6.32□□□□□ -1.4
NCK1P16333 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms