Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 AC138089.1-201ENST00000450847 967 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 MTND2P6-201ENST00000455337 1030 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AC026254.1-201ENST00000479473 431 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AC005412.2-201ENST00000492004 341 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AC093720.1-201ENST00000505681 714 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.24□□□□□ -1.25
COL6A2P12110 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 AP003499.1-201ENST00000527217 574 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
COL6A2P12110 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 OR4A1P-201ENST00000532342 920 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 NPM1P35-201ENST00000533043 868 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 DPPA3P2-201ENST00000553589 478 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 MRPS21P9-201ENST00000571150 257 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 MIR4509-3-201ENST00000578671 94 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 MIR4509-2-201ENST00000583920 94 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 IGLJCOR18-201ENST00000584002 424 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 MTCO2P2-201ENST00000591258 225 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 RPP40P2-201ENST00000603596 712 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 MIR8084-201ENST00000614105 89 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 MIR4509-1-201ENST00000618224 94 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 AL391380.1-201ENST00000439300 1432 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 AL669831.5-218ENST00000591702 1873 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AC067942.1-201ENST00000488045 1493 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 ENO1P4-201ENST00000416471 1785 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A2P12110 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 RBMX2P2-201ENST00000257020 946 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 RN7SKP76-201ENST00000364419 323 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 PPCS-204ENST00000372562 966 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A2P12110 RNY3P9-201ENST00000384727 106 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
COL6A2P12110 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A2P12110 AC020983.1-201ENST00000417063 543 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 RPL12P43-201ENST00000420608 499 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A2P12110 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.23□□□□□ -1.25
COL6A2P12110 AC104698.1-201ENST00000435671 276 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A2P12110 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A2P12110 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A2P12110 AC090543.1-201ENST00000492168 485 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 PCNAP1-201ENST00000505363 709 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 AC008496.1-201ENST00000509131 295 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 RNU5A-7P-201ENST00000515979 116 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
COL6A2P12110 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC7.23□□□□□ -1.25
COL6A2P12110 ST13P6-201ENST00000522430 1102 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 AC021451.1-201ENST00000523498 1129 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A2P12110 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A2P12110 SRMP2-201ENST00000553832 916 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A2P12110 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A2P12110 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC7.23□□□□□ -1.25
COL6A2P12110 AC015801.1-201ENST00000585651 153 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 AP001357.1-201ENST00000586304 1053 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 BNIP3P24-201ENST00000593398 557 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms