Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.29□□□□□ -1.56
IFNA1P01562 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFNA1P01562 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
IFNA1P01562 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
IFNA1P01562 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFNA1P01562 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFNA1P01562 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFNA1P01562 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFNA1P01562 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
IFNA1P01562 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
IFNA1P01562 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 AP000432.2-201ENST00000624164 2048 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.28□□□□□ -1.56
IFNA1P01562 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.28□□□□□ -1.56
IFNA1P01562 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
IFNA1P01562 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
IFNA1P01562 RN7SKP186-201ENST00000365371 303 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 RNU1-16P-201ENST00000365477 164 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 RPL12P1-201ENST00000374520 498 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
IFNA1P01562 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
IFNA1P01562 RPL23AP17-201ENST00000401064 499 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 RN7SKP161-201ENST00000411110 305 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 RPS26P38-201ENST00000414476 348 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 RPSAP2-201ENST00000416785 888 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.28□□□□□ -1.56
IFNA1P01562 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 FTOP1-201ENST00000419363 861 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.28□□□□□ -1.56
IFNA1P01562 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
IFNA1P01562 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.28□□□□□ -1.56
IFNA1P01562 SUMO2P8-201ENST00000434672 286 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 LSM3P3-201ENST00000436601 306 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 AL390879.1-201ENST00000439143 386 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
IFNA1P01562 VN1R38P-201ENST00000450265 887 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.28□□□□□ -1.56
IFNA1P01562 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC5.28□□□□□ -1.56
IFNA1P01562 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.28□□□□□ -1.56
IFNA1P01562 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.28□□□□□ -1.56
IFNA1P01562 FAM30C-201ENST00000561158 410 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.28□□□□□ -1.56
IFNA1P01562 LINC00674-202ENST00000590734 160 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.28□□□□□ -1.56
IFNA1P01562 AC125494.2-201ENST00000602431 657 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 AC024589.2-201ENST00000605642 1294 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 AC006335.3-201ENST00000613408 292 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 AC241377.1-201ENST00000619797 406 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 AC106795.5-201ENST00000623288 454 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC5.28□□□□□ -1.56
IFNA1P01562 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
IFNA1P01562 AL139254.2-202ENST00000641937 1156 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.28□□□□□ -1.56
IFNA1P01562 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
IFNA1P01562 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.28□□□□□ -1.56
IFNA1P01562 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.28□□□□□ -1.56
IFNA1P01562 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFNA1P01562 SHQ1P1-201ENST00000437111 1544 ntBASIC5.28□□□□□ -1.56
IFNA1P01562 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.27□□□□□ -1.57
IFNA1P01562 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
IFNA1P01562 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 PQLC2L-203ENST00000449199 1484 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.27□□□□□ -1.57
IFNA1P01562 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 BCORP1-203ENST00000513194 5093 ntBASIC5.27□□□□□ -1.57
IFNA1P01562 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 RN7SKP211-201ENST00000363328 315 ntBASIC5.27□□□□□ -1.57
IFNA1P01562 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
IFNA1P01562 AL049697.3-201ENST00000406493 982 ntBASIC5.27□□□□□ -1.57
IFNA1P01562 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC5.27□□□□□ -1.57
IFNA1P01562 CTSLP8-201ENST00000413075 967 ntBASIC5.27□□□□□ -1.57
IFNA1P01562 PPIAP2-201ENST00000414143 492 ntBASIC5.27□□□□□ -1.57
IFNA1P01562 AL663061.1-201ENST00000416625 580 ntBASIC5.27□□□□□ -1.57
IFNA1P01562 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC5.27□□□□□ -1.57
IFNA1P01562 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC5.27□□□□□ -1.57
IFNA1P01562 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.27□□□□□ -1.57
IFNA1P01562 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
IFNA1P01562 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms