Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 RNA5SP172-201ENST00000365061 118 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 RNA5SP152-201ENST00000365184 110 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 RN7SKP62-201ENST00000384539 329 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AP003385.1-201ENST00000426387 893 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 MYL6P3-201ENST00000436904 432 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AL136455.1-201ENST00000441083 1240 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC234771.4-201ENST00000441416 730 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 DEFA11P-201ENST00000446470 261 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 KF459542.1-201ENST00000450908 553 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 NPM1P9-201ENST00000453156 844 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC010878.1-201ENST00000456500 1047 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 RPS26P11-201ENST00000463445 348 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AP000805.1-201ENST00000471604 784 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 RPS26P6-201ENST00000475156 348 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 RPS4XP23-201ENST00000487801 237 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC036176.3-201ENST00000602456 418 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 MIR6849-201ENST00000618543 69 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC004943.1-203ENST00000624370 1074 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AC005858.3-201ENST00000624756 589 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.31□□□□□ -1.4
NPIPA3F8WFD2 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AL121949.2-201ENST00000403446 1548 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 CCDC150P1-201ENST00000537123 2215 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 RN7SKP189-201ENST00000365042 330 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AL079341.1-201ENST00000404701 1207 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 RN7SKP232-201ENST00000410170 290 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 RPLP1P10-201ENST00000413972 339 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AL355994.1-201ENST00000424379 260 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AL034399.1-201ENST00000451535 380 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 RN7SKP198-201ENST00000459286 306 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 RPS14P8-201ENST00000478778 369 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AC044810.1-201ENST00000480271 711 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AP005902.2-201ENST00000518393 307 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AC022616.2-201ENST00000523185 300 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 BTG1P1-201ENST00000540396 508 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 MIR6885-201ENST00000612241 66 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 CLUHP10-201ENST00000631979 980 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AC087269.2-201ENST00000641764 975 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 AC095038.1-201ENST00000429248 1591 ntBASIC6.3□□□□□ -1.4
NPIPA3F8WFD2 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms