Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 SNORA70.3-201ENST00000365075 132 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 MIR191-201ENST00000384873 92 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 RNA5SP474-201ENST00000391234 90 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AC019178.1-201ENST00000392337 440 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 UBBP1-201ENST00000392399 473 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 RN7SKP146-201ENST00000410242 334 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AL773545.3-201ENST00000414297 706 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 GAPDHP20-201ENST00000444107 1007 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AL133372.1-201ENST00000493565 745 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AC087575.1-201ENST00000585087 229 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 HYDIN2-203ENST00000614586 13885 ntBASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHPF2Q9P2E5 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 RACGAP1P-201ENST00000550663 1879 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 CASKP1-201ENST00000412870 582 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 SMARCE1P1-201ENST00000417747 1186 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 GAPDHP57-201ENST00000424400 585 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 BX119917.1-201ENST00000432517 502 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AC044810.1-201ENST00000480271 711 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 RNA5SP318-201ENST00000516352 92 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 TRAV11-201ENST00000539512 339 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AC005519.1-201ENST00000554490 601 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 MFSD8-217ENST00000641178 4374 ntBASIC8.68□□□□□ -1.02
CHPF2Q9P2E5 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms