Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 OR7A18P-201ENST00000600416 277 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC021749.1-201ENST00000604322 607 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC008626.1-201ENST00000604384 255 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AL591222.2-201ENST00000604443 754 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AL353807.4-201ENST00000604995 257 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AL592504.1-201ENST00000605319 439 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC123788.2-201ENST00000612290 283 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC024257.5-201ENST00000612739 531 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 pRNA.12-201ENST00000614353 90 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 pRNA.3-201ENST00000615048 90 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
ATG4DQ86TL0 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
ATG4DQ86TL0 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
ATG4DQ86TL0 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.28
ATG4DQ86TL0 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
ATG4DQ86TL0 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.09□□□□□ -1.28
ATG4DQ86TL0 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RNU4-68P-201ENST00000364314 141 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC234772.1-201ENST00000377927 937 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RNU6-354P-201ENST00000383862 107 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RNU6-610P-201ENST00000384264 107 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RNU6-636P-201ENST00000384598 107 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 FTH1P26-201ENST00000406512 701 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RNU4-27P-201ENST00000410889 139 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 MTND3P23-201ENST00000431980 347 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 OR5M13P-201ENST00000433944 937 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RPL7L1P11-201ENST00000446092 721 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC234782.3-201ENST00000461229 433 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RPL21P18-201ENST00000469899 480 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RPL5P14-201ENST00000494197 878 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RN7SKP14-201ENST00000516000 329 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC020937.1-201ENST00000519677 1013 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 BTF3P1-201ENST00000522014 495 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AP005639.2-201ENST00000527592 928 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC079064.1-201ENST00000528365 362 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC027104.1-201ENST00000563702 681 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AL512347.1-201ENST00000566420 503 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms