Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 TAC1-203ENST00000350485 975 ntTSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 RNA5SP145-201ENST00000363124 125 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 Y_RNA.472-201ENST00000384322 102 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 U3.34-201ENST00000408198 212 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AL049734.1-201ENST00000422384 608 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 PAICSP5-201ENST00000430406 1217 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 MTCO2P11-201ENST00000431069 680 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 CFL1P8-201ENST00000436148 475 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 LINC01647-201ENST00000453135 1285 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 CYCSP20-201ENST00000473154 315 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC104164.4-201ENST00000483456 493 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 RN7SL745P-201ENST00000484900 299 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 RN7SL608P-201ENST00000492377 279 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC112203.1-201ENST00000506315 1020 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 LINC01331-201ENST00000507781 568 ntTSL 4 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 GAPDHP71-201ENST00000511530 1003 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC025465.4-201ENST00000513422 638 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 MTCYBP44-201ENST00000514835 823 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC116347.2-201ENST00000514912 523 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 IGLC5-201ENST00000519670 293 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 OR4A9P-201ENST00000526326 944 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 RAN-211ENST00000541679 572 ntTSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 NPM1P47-201ENST00000560843 856 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 DPPA2P4-201ENST00000563717 878 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 MTND4LP24-201ENST00000572277 291 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 MIR4450-201ENST00000583589 65 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AL358335.3-201ENST00000604678 327 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC008945.2-201ENST00000606056 604 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AP003392.5-201ENST00000607857 415 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 RBM22P6-201ENST00000611682 867 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC009878.1-201ENST00000621819 340 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC024580.1-201ENST00000623020 674 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC079602.4-201ENST00000637836 532 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 AC068205.4-201ENST00000637880 804 ntBASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 ADH1C-204ENST00000515683 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC8.39□□□□□ -1.07
FOXR1Q6PIV2 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC007848.1-201ENST00000538430 1405 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 FO393411.1-201ENST00000325612 420 ntBASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
FOXR1Q6PIV2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms