Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.83□□□□□ -1.16
CCNA1P78396 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CCNA1P78396 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.83□□□□□ -1.16
CCNA1P78396 AC004241.2-201ENST00000614562 444 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AL035425.4-201ENST00000624509 1063 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AP001052.1-201ENST00000626421 99 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 AC010325.3-201ENST00000641084 394 ntBASIC7.83□□□□□ -1.16
CCNA1P78396 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
CCNA1P78396 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.83□□□□□ -1.16
CCNA1P78396 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CCNA1P78396 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCNA1P78396 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
CCNA1P78396 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CCNA1P78396 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
CCNA1P78396 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.82□□□□□ -1.16
CCNA1P78396 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.82□□□□□ -1.16
CCNA1P78396 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 PAICSP2-201ENST00000429118 1150 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 AC092106.2-201ENST00000436597 487 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 COL11A2P1-205ENST00000441798 676 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 PFN1P11-201ENST00000445829 389 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.82□□□□□ -1.16
CCNA1P78396 RPL23AP28-201ENST00000448062 470 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.82□□□□□ -1.16
CCNA1P78396 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.82□□□□□ -1.16
CCNA1P78396 AC113367.2-201ENST00000505749 160 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 MAST4-IT1-201ENST00000514241 658 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.82□□□□□ -1.16
CCNA1P78396 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.82□□□□□ -1.16
CCNA1P78396 AC140063.1-201ENST00000541343 259 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 AC013283.1-201ENST00000557282 492 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 ANP32BP1-202ENST00000568553 737 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CCNA1P78396 AC134669.1-201ENST00000581275 672 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CCNA1P78396 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.82□□□□□ -1.16
CCNA1P78396 AC091133.5-201ENST00000603088 301 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.82□□□□□ -1.16
CCNA1P78396 AC097641.3-201ENST00000613523 464 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 MIR6861-201ENST00000618657 64 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 AC023818.2-201ENST00000623817 2304 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
CCNA1P78396 AL451064.2-201ENST00000623514 1654 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 AL121949.2-201ENST00000403446 1548 ntBASIC7.82□□□□□ -1.16
CCNA1P78396 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CCNA1P78396 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
CCNA1P78396 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.81□□□□□ -1.16
CCNA1P78396 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CCNA1P78396 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
CCNA1P78396 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 RN7SKP237-201ENST00000364663 301 ntBASIC7.81□□□□□ -1.16
CCNA1P78396 AL590762.1-201ENST00000391782 432 ntBASIC7.81□□□□□ -1.16
CCNA1P78396 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.81□□□□□ -1.16
CCNA1P78396 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.81□□□□□ -1.16
CCNA1P78396 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.81□□□□□ -1.16
CCNA1P78396 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.81□□□□□ -1.16
CCNA1P78396 UBBP5-201ENST00000446970 266 ntBASIC7.81□□□□□ -1.16
CCNA1P78396 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.81□□□□□ -1.16
CCNA1P78396 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.81□□□□□ -1.16
CCNA1P78396 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.81□□□□□ -1.16
CCNA1P78396 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC7.81□□□□□ -1.16
CCNA1P78396 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.81□□□□□ -1.16
CCNA1P78396 AC026826.3-201ENST00000561747 158 ntBASIC7.81□□□□□ -1.16
CCNA1P78396 NDUFA5P11-201ENST00000567995 343 ntBASIC7.81□□□□□ -1.16
CCNA1P78396 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.81□□□□□ -1.16
CCNA1P78396 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.81□□□□□ -1.16
CCNA1P78396 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CCNA1P78396 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.81□□□□□ -1.16
CCNA1P78396 AL354702.2-202ENST00000641481 890 ntBASIC7.81□□□□□ -1.16
CCNA1P78396 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms