Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNA5SP115-201ENST00000411160 107 ntBASIC4.7□□□□□ -1.66
RPL39P62891 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC4.7□□□□□ -1.66
RPL39P62891 VDAC1P10-201ENST00000416715 891 ntBASIC4.7□□□□□ -1.66
RPL39P62891 EIF4A1P5-201ENST00000428062 1095 ntBASIC4.7□□□□□ -1.66
RPL39P62891 AC239367.3-201ENST00000428996 814 ntBASIC4.7□□□□□ -1.66
RPL39P62891 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC4.7□□□□□ -1.66
RPL39P62891 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 H3F3BP1-201ENST00000440551 403 ntBASIC4.7□□□□□ -1.66
RPL39P62891 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC4.7□□□□□ -1.66
RPL39P62891 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC4.7□□□□□ -1.66
RPL39P62891 RPLP0P1-201ENST00000457002 361 ntBASIC4.7□□□□□ -1.66
RPL39P62891 AC091982.1-202ENST00000473923 343 ntBASIC4.7□□□□□ -1.66
RPL39P62891 AC079594.1-201ENST00000489757 331 ntBASIC4.7□□□□□ -1.66
RPL39P62891 RPL23AP80-201ENST00000495605 424 ntBASIC4.7□□□□□ -1.66
RPL39P62891 RN7SL143P-201ENST00000496780 297 ntBASIC4.7□□□□□ -1.66
RPL39P62891 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.7□□□□□ -1.66
RPL39P62891 OXR1-212ENST00000521592 993 ntTSL 5 BASIC4.7□□□□□ -1.66
RPL39P62891 AP005639.1-201ENST00000526939 192 ntBASIC4.7□□□□□ -1.66
RPL39P62891 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC4.7□□□□□ -1.66
RPL39P62891 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RPL39P62891 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC4.7□□□□□ -1.66
RPL39P62891 OR4F28P-201ENST00000559128 938 ntBASIC4.7□□□□□ -1.66
RPL39P62891 UBE2CP4-201ENST00000561405 535 ntBASIC4.7□□□□□ -1.66
RPL39P62891 OR4F8P-201ENST00000589943 937 ntBASIC4.7□□□□□ -1.66
RPL39P62891 AC004908.1-201ENST00000606572 541 ntBASIC4.7□□□□□ -1.66
RPL39P62891 AL139123.1-201ENST00000612008 430 ntBASIC4.7□□□□□ -1.66
RPL39P62891 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC4.7□□□□□ -1.66
RPL39P62891 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC4.7□□□□□ -1.66
RPL39P62891 FGL2-202ENST00000637771 989 ntBASIC4.7□□□□□ -1.66
RPL39P62891 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RPL39P62891 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC4.7□□□□□ -1.66
RPL39P62891 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC4.7□□□□□ -1.66
RPL39P62891 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC4.7□□□□□ -1.66
RPL39P62891 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPL39P62891 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 NPM1P14-201ENST00000343743 866 ntBASIC4.69□□□□□ -1.66
RPL39P62891 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 U3.1-201ENST00000362500 215 ntBASIC4.69□□□□□ -1.66
RPL39P62891 RNU1-46P-201ENST00000384425 164 ntBASIC4.69□□□□□ -1.66
RPL39P62891 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 RNA5SP251-201ENST00000410614 137 ntBASIC4.69□□□□□ -1.66
RPL39P62891 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 AC009237.9-201ENST00000414800 347 ntBASIC4.69□□□□□ -1.66
RPL39P62891 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC4.69□□□□□ -1.66
RPL39P62891 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC4.69□□□□□ -1.66
RPL39P62891 AC097721.1-201ENST00000427150 1253 ntBASIC4.69□□□□□ -1.66
RPL39P62891 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC4.69□□□□□ -1.66
RPL39P62891 AC018804.1-201ENST00000430381 618 ntBASIC4.69□□□□□ -1.66
RPL39P62891 AL645936.2-201ENST00000430565 928 ntBASIC4.69□□□□□ -1.66
RPL39P62891 RPS10P3-201ENST00000439253 494 ntBASIC4.69□□□□□ -1.66
RPL39P62891 ARMC8P1-201ENST00000443069 1289 ntBASIC4.69□□□□□ -1.66
RPL39P62891 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 MEF2AP1-201ENST00000454867 863 ntBASIC4.69□□□□□ -1.66
RPL39P62891 AC008026.1-201ENST00000460492 447 ntBASIC4.69□□□□□ -1.66
RPL39P62891 AC083906.1-201ENST00000509298 406 ntBASIC4.69□□□□□ -1.66
RPL39P62891 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 AP003041.2-201ENST00000525666 1180 ntBASIC4.69□□□□□ -1.66
RPL39P62891 PHBP2-201ENST00000532859 806 ntBASIC4.69□□□□□ -1.66
RPL39P62891 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 COX6CP11-201ENST00000555293 229 ntBASIC4.69□□□□□ -1.66
RPL39P62891 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 AC090971.3-201ENST00000557871 1041 ntBASIC4.69□□□□□ -1.66
RPL39P62891 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC4.69□□□□□ -1.66
RPL39P62891 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC4.69□□□□□ -1.66
RPL39P62891 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC4.69□□□□□ -1.66
RPL39P62891 AC113361.1-201ENST00000606683 543 ntBASIC4.69□□□□□ -1.66
RPL39P62891 AL137246.2-201ENST00000613439 662 ntBASIC4.69□□□□□ -1.66
RPL39P62891 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC4.69□□□□□ -1.66
RPL39P62891 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 JAML-213ENST00000640745 951 ntTSL 5 BASIC4.69□□□□□ -1.66
RPL39P62891 AC068769.1-201ENST00000474767 2426 ntBASIC4.69□□□□□ -1.66
RPL39P62891 DLEU2L-201ENST00000371086 3555 ntBASIC4.69□□□□□ -1.66
RPL39P62891 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPL39P62891 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms