Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL390198.2-201ENST00000510553 222 ntBASIC5.6□□□□□ -1.51
LMO4P61968 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LMO4P61968 AL445383.1-201ENST00000554689 874 ntBASIC5.6□□□□□ -1.51
LMO4P61968 MIR3908-201ENST00000579798 126 ntBASIC5.6□□□□□ -1.51
LMO4P61968 AC087575.1-201ENST00000585087 229 ntBASIC5.6□□□□□ -1.51
LMO4P61968 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.6□□□□□ -1.51
LMO4P61968 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.6□□□□□ -1.51
LMO4P61968 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO4P61968 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO4P61968 AC004241.2-201ENST00000614562 444 ntBASIC5.6□□□□□ -1.51
LMO4P61968 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO4P61968 AC183089.2-201ENST00000637931 916 ntBASIC5.6□□□□□ -1.51
LMO4P61968 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO4P61968 AL096816.1-201ENST00000623300 2920 ntBASIC5.6□□□□□ -1.51
LMO4P61968 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO4P61968 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO4P61968 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO4P61968 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO4P61968 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
LMO4P61968 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC5.59□□□□□ -1.51
LMO4P61968 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
LMO4P61968 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
LMO4P61968 RN7SKP171-201ENST00000364417 303 ntBASIC5.59□□□□□ -1.51
LMO4P61968 RN7SKP188-201ENST00000410789 317 ntBASIC5.59□□□□□ -1.51
LMO4P61968 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 YY1P1-201ENST00000427625 668 ntBASIC5.59□□□□□ -1.51
LMO4P61968 DNAJA1P6-201ENST00000437347 354 ntBASIC5.59□□□□□ -1.51
LMO4P61968 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO4P61968 DEFA11P-201ENST00000446470 261 ntBASIC5.59□□□□□ -1.51
LMO4P61968 UBBP5-201ENST00000446970 266 ntBASIC5.59□□□□□ -1.51
LMO4P61968 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 AC019084.1-201ENST00000457337 432 ntBASIC5.59□□□□□ -1.51
LMO4P61968 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO4P61968 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO4P61968 SSX8-201ENST00000506270 579 ntBASIC5.59□□□□□ -1.51
LMO4P61968 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.59□□□□□ -1.51
LMO4P61968 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.59□□□□□ -1.51
LMO4P61968 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO4P61968 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.59□□□□□ -1.51
LMO4P61968 OR4A41P-201ENST00000533053 928 ntBASIC5.59□□□□□ -1.51
LMO4P61968 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.59□□□□□ -1.51
LMO4P61968 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.59□□□□□ -1.51
LMO4P61968 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO4P61968 AC023310.2-201ENST00000553844 547 ntBASIC5.59□□□□□ -1.51
LMO4P61968 AC107958.1-201ENST00000556576 290 ntBASIC5.59□□□□□ -1.51
LMO4P61968 AC121758.1-202ENST00000556917 658 ntBASIC5.59□□□□□ -1.51
LMO4P61968 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO4P61968 MT1CP-201ENST00000567054 174 ntBASIC5.59□□□□□ -1.51
LMO4P61968 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC5.59□□□□□ -1.51
LMO4P61968 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO4P61968 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.59□□□□□ -1.51
LMO4P61968 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO4P61968 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO4P61968 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.59□□□□□ -1.51
LMO4P61968 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO4P61968 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.59□□□□□ -1.51
LMO4P61968 WBP1LP12-201ENST00000604449 331 ntBASIC5.59□□□□□ -1.51
LMO4P61968 AC114477.1-201ENST00000605097 605 ntBASIC5.59□□□□□ -1.51
LMO4P61968 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.59□□□□□ -1.51
LMO4P61968 MIR7854-201ENST00000620068 65 ntBASIC5.59□□□□□ -1.51
LMO4P61968 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 AC089999.3-201ENST00000622440 577 ntBASIC5.59□□□□□ -1.51
LMO4P61968 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO4P61968 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO4P61968 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO4P61968 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.59□□□□□ -1.51
LMO4P61968 MAPK10-357ENST00000641831 2858 ntBASIC5.59□□□□□ -1.51
LMO4P61968 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LMO4P61968 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.59□□□□□ -1.52
LMO4P61968 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.59□□□□□ -1.52
LMO4P61968 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LMO4P61968 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC5.59□□□□□ -1.52
LMO4P61968 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
LMO4P61968 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
LMO4P61968 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LMO4P61968 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LMO4P61968 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC5.59□□□□□ -1.52
LMO4P61968 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
LMO4P61968 UGT2B25P-201ENST00000511504 1586 ntBASIC5.59□□□□□ -1.52
LMO4P61968 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.58□□□□□ -1.52
LMO4P61968 AC020658.2-201ENST00000559030 4020 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms