Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.38□□□□□ -1.39
RFC3P40938 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.37□□□□□ -1.39
RFC3P40938 AL359195.2-201ENST00000623657 4412 ntBASIC6.37□□□□□ -1.39
RFC3P40938 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.37□□□□□ -1.39
RFC3P40938 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 AC007406.5-201ENST00000570140 3170 ntBASIC6.37□□□□□ -1.39
RFC3P40938 AC083806.2-201ENST00000617795 2685 ntBASIC6.37□□□□□ -1.39
RFC3P40938 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RFC3P40938 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RFC3P40938 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.37□□□□□ -1.39
RFC3P40938 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.37□□□□□ -1.39
RFC3P40938 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFC3P40938 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
RFC3P40938 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFC3P40938 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
RFC3P40938 MIR1266-201ENST00000408125 84 ntBASIC6.37□□□□□ -1.39
RFC3P40938 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.37□□□□□ -1.39
RFC3P40938 AL354794.2-201ENST00000424795 1248 ntBASIC6.37□□□□□ -1.39
RFC3P40938 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.37□□□□□ -1.39
RFC3P40938 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.37□□□□□ -1.39
RFC3P40938 SUMO2P8-201ENST00000434672 286 ntBASIC6.37□□□□□ -1.39
RFC3P40938 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.37□□□□□ -1.39
RFC3P40938 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.37□□□□□ -1.39
RFC3P40938 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.37□□□□□ -1.39
RFC3P40938 PRDX1P1-201ENST00000449329 596 ntBASIC6.37□□□□□ -1.39
RFC3P40938 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.37□□□□□ -1.39
RFC3P40938 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.37□□□□□ -1.39
RFC3P40938 RN7SL492P-201ENST00000460700 295 ntBASIC6.37□□□□□ -1.39
RFC3P40938 UOX-201ENST00000471089 899 ntBASIC6.37□□□□□ -1.39
RFC3P40938 PPP1R2P6-201ENST00000478565 588 ntBASIC6.37□□□□□ -1.39
RFC3P40938 AC092349.1-201ENST00000504903 310 ntBASIC6.37□□□□□ -1.39
RFC3P40938 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.37□□□□□ -1.39
RFC3P40938 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.37□□□□□ -1.39
RFC3P40938 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.37□□□□□ -1.39
RFC3P40938 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.37□□□□□ -1.39
RFC3P40938 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 PPIAP6-201ENST00000557078 499 ntBASIC6.37□□□□□ -1.39
RFC3P40938 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.37□□□□□ -1.39
RFC3P40938 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.37□□□□□ -1.39
RFC3P40938 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.37□□□□□ -1.39
RFC3P40938 MRPL57P3-201ENST00000619218 176 ntBASIC6.37□□□□□ -1.39
RFC3P40938 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
RFC3P40938 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RFC3P40938 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.37□□□□□ -1.39
RFC3P40938 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
RFC3P40938 MELK-208ENST00000536987 2125 ntTSL 2 BASIC6.37□□□□□ -1.39
RFC3P40938 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.37□□□□□ -1.39
RFC3P40938 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFC3P40938 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.36□□□□□ -1.39
RFC3P40938 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFC3P40938 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RFC3P40938 AC095038.1-201ENST00000429248 1591 ntBASIC6.36□□□□□ -1.39
RFC3P40938 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFC3P40938 AC067942.1-201ENST00000488045 1493 ntBASIC6.36□□□□□ -1.39
RFC3P40938 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.36□□□□□ -1.39
RFC3P40938 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.36□□□□□ -1.39
RFC3P40938 RN7SKP184-201ENST00000362348 333 ntBASIC6.36□□□□□ -1.39
RFC3P40938 RNA5SP152-201ENST00000365184 110 ntBASIC6.36□□□□□ -1.39
RFC3P40938 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFC3P40938 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.36□□□□□ -1.39
RFC3P40938 AL121916.1-201ENST00000429405 308 ntBASIC6.36□□□□□ -1.39
RFC3P40938 AC013403.1-201ENST00000436954 263 ntBASIC6.36□□□□□ -1.39
RFC3P40938 AL356121.1-201ENST00000442911 156 ntBASIC6.36□□□□□ -1.39
RFC3P40938 CEACAMP5-201ENST00000448037 961 ntBASIC6.36□□□□□ -1.39
RFC3P40938 RPL31P11-202ENST00000454082 372 ntBASIC6.36□□□□□ -1.39
RFC3P40938 CEACAMP11-201ENST00000455211 583 ntBASIC6.36□□□□□ -1.39
RFC3P40938 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.36□□□□□ -1.39
RFC3P40938 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 GLRXP3-201ENST00000470810 321 ntBASIC6.36□□□□□ -1.39
RFC3P40938 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 IGLC4-201ENST00000517690 248 ntBASIC6.36□□□□□ -1.39
RFC3P40938 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.36□□□□□ -1.39
RFC3P40938 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.36□□□□□ -1.39
RFC3P40938 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms