Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CIITAP33076 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.7□□□□□ -1.18
CIITAP33076 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CIITAP33076 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.69□□□□□ -1.18
CIITAP33076 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CIITAP33076 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CIITAP33076 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CIITAP33076 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CIITAP33076 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CIITAP33076 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.69□□□□□ -1.18
CIITAP33076 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CIITAP33076 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CIITAP33076 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CIITAP33076 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.69□□□□□ -1.18
CIITAP33076 CYCSP17-201ENST00000407870 315 ntBASIC7.69□□□□□ -1.18
CIITAP33076 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC7.69□□□□□ -1.18
CIITAP33076 AC091390.2-201ENST00000432573 374 ntBASIC7.69□□□□□ -1.18
CIITAP33076 AC083855.1-201ENST00000440041 258 ntBASIC7.69□□□□□ -1.18
CIITAP33076 GAPDHP20-201ENST00000444107 1007 ntBASIC7.69□□□□□ -1.18
CIITAP33076 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.69□□□□□ -1.18
CIITAP33076 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.69□□□□□ -1.18
CIITAP33076 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.69□□□□□ -1.18
CIITAP33076 AC022080.2-201ENST00000452932 533 ntBASIC7.69□□□□□ -1.18
CIITAP33076 RPL31P11-202ENST00000454082 372 ntBASIC7.69□□□□□ -1.18
CIITAP33076 RN7SKP198-201ENST00000459286 306 ntBASIC7.69□□□□□ -1.18
CIITAP33076 RN7SL216P-201ENST00000471607 298 ntBASIC7.69□□□□□ -1.18
CIITAP33076 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.69□□□□□ -1.18
CIITAP33076 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC7.69□□□□□ -1.18
CIITAP33076 AC095057.1-201ENST00000507583 168 ntBASIC7.69□□□□□ -1.18
CIITAP33076 NREP-217ENST00000509025 987 ntTSL 3 BASIC7.69□□□□□ -1.18
CIITAP33076 AC011352.2-201ENST00000514574 1016 ntBASIC7.69□□□□□ -1.18
CIITAP33076 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.69□□□□□ -1.18
CIITAP33076 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.69□□□□□ -1.18
CIITAP33076 IGKV2D-38-201ENST00000518423 240 ntBASIC7.69□□□□□ -1.18
CIITAP33076 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.69□□□□□ -1.18
CIITAP33076 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.69□□□□□ -1.18
CIITAP33076 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.69□□□□□ -1.18
CIITAP33076 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.69□□□□□ -1.18
CIITAP33076 AC120057.5-201ENST00000623840 154 ntBASIC7.69□□□□□ -1.18
CIITAP33076 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.69□□□□□ -1.18
CIITAP33076 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CIITAP33076 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CIITAP33076 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
CIITAP33076 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CIITAP33076 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.69□□□□□ -1.18
CIITAP33076 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.69□□□□□ -1.18
CIITAP33076 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CIITAP33076 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CIITAP33076 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 AC011379.1-201ENST00000508713 3025 ntBASIC7.68□□□□□ -1.18
CIITAP33076 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.68□□□□□ -1.18
CIITAP33076 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CIITAP33076 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 AC092111.1-201ENST00000618256 3358 ntBASIC7.68□□□□□ -1.18
CIITAP33076 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.68□□□□□ -1.18
CIITAP33076 RPL24P4-201ENST00000326586 421 ntBASIC7.68□□□□□ -1.18
CIITAP33076 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.68□□□□□ -1.18
CIITAP33076 AC006509.1-201ENST00000420788 634 ntBASIC7.68□□□□□ -1.18
CIITAP33076 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.68□□□□□ -1.18
CIITAP33076 AC114982.2-201ENST00000461396 358 ntBASIC7.68□□□□□ -1.18
CIITAP33076 RPS4XP17-201ENST00000479057 754 ntBASIC7.68□□□□□ -1.18
CIITAP33076 AC009567.2-201ENST00000502989 349 ntBASIC7.68□□□□□ -1.18
CIITAP33076 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.68□□□□□ -1.18
CIITAP33076 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.68□□□□□ -1.18
CIITAP33076 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.68□□□□□ -1.18
CIITAP33076 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CIITAP33076 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.68□□□□□ -1.18
CIITAP33076 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.68□□□□□ -1.18
CIITAP33076 SNRPCP6-201ENST00000528310 210 ntBASIC7.68□□□□□ -1.18
CIITAP33076 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CIITAP33076 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.68□□□□□ -1.18
CIITAP33076 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.68□□□□□ -1.18
CIITAP33076 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.68□□□□□ -1.18
CIITAP33076 AL034374.2-201ENST00000605281 548 ntBASIC7.68□□□□□ -1.18
CIITAP33076 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.68□□□□□ -1.18
CIITAP33076 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.68□□□□□ -1.18
CIITAP33076 AC127071.2-201ENST00000623293 527 ntBASIC7.68□□□□□ -1.18
CIITAP33076 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.68□□□□□ -1.18
CIITAP33076 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.68□□□□□ -1.18
CIITAP33076 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.68□□□□□ -1.18
CIITAP33076 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CIITAP33076 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CIITAP33076 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CIITAP33076 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms