Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 AC087683.1-201ENST00000591187 441 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 AC006116.6-201ENST00000593258 1103 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 AL121655.1-201ENST00000605811 308 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 AC063943.3-201ENST00000615562 356 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 IARS2P1-201ENST00000508226 3173 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
ALDH1A1P00352 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 MTCO1P28-201ENST00000574177 1528 ntBASIC9.1□□□□□ -0.95
ALDH1A1P00352 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALDH1A1P00352 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 TDGF1-201ENST00000296145 2513 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 BHLHB9-205ENST00000457056 4082 ntAPPRIS P1 TSL 4 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 KBTBD4-204ENST00000526005 2444 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 RBPJP6-201ENST00000411556 1431 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 OR56A1-201ENST00000316650 1071 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 FGF7P2-201ENST00000332473 296 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 RNA5SP389-201ENST00000362610 115 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 RNA5SP226-201ENST00000362653 115 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AL080285.1-201ENST00000404225 984 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 Z98752.2-201ENST00000432727 312 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 GTF2IP3-201ENST00000433887 494 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 NDUFS5P5-201ENST00000437256 321 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AL356133.1-201ENST00000444762 372 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 RPL24P8-201ENST00000446071 474 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 MTND5P20-201ENST00000448677 143 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 ZNF114P1-201ENST00000453500 292 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 C1DP3-201ENST00000455013 423 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 SNORA35.1-201ENST00000458908 128 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC007547.2-201ENST00000468802 360 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 FTH1P4-201ENST00000480365 553 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 RPS12P31-201ENST00000491419 398 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 RPL23AP80-201ENST00000495605 424 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC095052.1-201ENST00000509955 863 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 Y_RNA.702-201ENST00000516843 96 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 DUXAP2-201ENST00000519198 589 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC130366.1-201ENST00000526505 1192 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 OR4A11P-201ENST00000529557 906 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC084033.3-201ENST00000551421 451 ntTSL 2 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC044860.3-201ENST00000559957 368 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 BGLT3-201ENST00000564523 994 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC002400.1-201ENST00000569310 726 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 PRR13P4-201ENST00000577786 421 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC024060.1-201ENST00000607052 494 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AP000255.1-201ENST00000610276 676 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 Six3os1_2.1-201ENST00000616963 217 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC012254.5-201ENST00000623573 478 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC012557.3-201ENST00000626439 255 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 FP325313.1-201ENST00000638228 703 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 ERG-210ENST00000442448 5034 ntTSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms