Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX3Q99909 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX3Q99909 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.98□□□□□ -1.45
SSX3Q99909 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX3Q99909 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX3Q99909 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX3Q99909 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 RN7SKP36-201ENST00000363997 312 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 RN7SKP257-201ENST00000364525 309 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX3Q99909 AL451142.1-201ENST00000375867 775 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 RNU6-167P-201ENST00000384292 106 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 SNORA68-201ENST00000384437 133 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 OR2W4P-201ENST00000406496 926 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AL117344.1-201ENST00000407196 616 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 RN7SKP117-201ENST00000410175 264 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX3Q99909 OR5W1P-201ENST00000423705 938 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX3Q99909 AL355994.1-201ENST00000424379 260 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX3Q99909 AC244033.1-201ENST00000426826 870 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 AL354983.1-201ENST00000434580 906 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 FUNDC2P2-202ENST00000443452 493 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX3Q99909 RNA5SP75-201ENST00000516841 111 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 RN7SKP233-201ENST00000517005 110 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX3Q99909 IGKV2-29-201ENST00000521304 372 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX3Q99909 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC5.97□□□□□ -1.45
SSX3Q99909 AC092368.2-201ENST00000565911 600 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AC011193.2-201ENST00000582638 367 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AC090241.1-201ENST00000587732 621 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AC024451.4-201ENST00000602578 752 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AL136139.1-201ENST00000605568 222 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX3Q99909 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SSX3Q99909 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 uc_338.37-201ENST00000620113 186 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 AC021422.1-201ENST00000621212 473 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX3Q99909 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX3Q99909 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC5.97□□□□□ -1.45
SSX3Q99909 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX3Q99909 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SSX3Q99909 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX3Q99909 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX3Q99909 QRSL1P3-201ENST00000552666 1316 ntBASIC5.97□□□□□ -1.45
SSX3Q99909 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SSX3Q99909 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX3Q99909 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SSX3Q99909 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
SSX3Q99909 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC5.96□□□□□ -1.45
SSX3Q99909 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SSX3Q99909 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SSX3Q99909 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
SSX3Q99909 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
SSX3Q99909 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SSX3Q99909 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
SSX3Q99909 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SSX3Q99909 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SSX3Q99909 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SSX3Q99909 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC5.96□□□□□ -1.46
SSX3Q99909 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSX3Q99909 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SSX3Q99909 OR5M2P-202ENST00000641241 4242 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 NXT2-204ENST00000372107 937 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 MIR575-201ENST00000385013 94 ntBASIC5.96□□□□□ -1.46
SSX3Q99909 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SSX3Q99909 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.96□□□□□ -1.46
SSX3Q99909 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.96□□□□□ -1.46
SSX3Q99909 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.96□□□□□ -1.46
SSX3Q99909 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms