Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 MIR5192-201ENST00000579892 92 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 RN7SL835P-201ENST00000579920 262 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 RN7SL657P-201ENST00000582431 293 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC098483.2-201ENST00000603158 454 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 AL355333.1-201ENST00000605632 279 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AL161901.1-201ENST00000624954 3425 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 TET1P1-201ENST00000426627 2301 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 KARSP2-201ENST00000415696 1639 ntBASIC6.54□□□□□ -1.36
SNX18Q96RF0 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.54□□□□□ -1.36
SNX18Q96RF0 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNX18Q96RF0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AL139384.2-201ENST00000613809 3590 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 OFD1P17-201ENST00000437639 3018 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 OR51C1P-202ENST00000641159 1444 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 RNA5SP514-201ENST00000363717 111 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 RNU6-819P-201ENST00000364116 107 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 RPSAP44-201ENST00000406712 884 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 GRPEL2P2-201ENST00000421856 670 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 GAPDHP73-201ENST00000423411 1007 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 FDPSP1-201ENST00000424976 1071 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 SNX18P14-201ENST00000429308 574 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 PMS2P9-201ENST00000441237 515 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 AL353803.3-201ENST00000444641 335 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 RPL34P22-201ENST00000468193 318 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC018523.1-201ENST00000534211 512 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 MIR3135A-201ENST00000578460 77 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC090774.2-201ENST00000584708 322 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC015801.1-201ENST00000585651 153 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 WBP1LP11-201ENST00000586141 328 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AP003117.1-201ENST00000602771 554 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC137695.2-201ENST00000603123 754 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC080112.3-201ENST00000612552 880 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC006335.3-201ENST00000613408 292 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC010998.3-201ENST00000613871 631 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 WBP1LP8-201ENST00000617401 327 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC119674.1-209ENST00000642031 997 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 API5P1-201ENST00000424316 1510 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC099654.3-201ENST00000447087 1546 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AC034229.2-201ENST00000566945 2508 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 UGT2B27P-201ENST00000505092 1620 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.53□□□□□ -1.36
SNX18Q96RF0 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms