Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VPS8Q8N3P4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AC002127.1-201ENST00000421305 225 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 RPL7AP51-201ENST00000422016 760 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 LAPTM4BP1-201ENST00000447781 690 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 RPS7P10-201ENST00000464254 603 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AC106822.1-201ENST00000502647 526 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AC244034.2-201ENST00000562504 509 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AC133552.4-201ENST00000576103 676 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AC015818.6-201ENST00000584274 634 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AL589765.6-201ENST00000601909 549 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 SFTPD-AS1-201ENST00000608229 5001 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 MIR541-201ENST00000401360 84 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AC245291.3-201ENST00000443400 292 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 RPL29P23-201ENST00000486188 442 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AK6-203ENST00000502819 743 ntTSL 5 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AP003033.2-201ENST00000528901 805 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 AL953862.2-201ENST00000603089 820 ntBASIC10.41□□□□□ -0.74
VPS8Q8N3P4 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
VPS8Q8N3P4 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS8Q8N3P4 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS8Q8N3P4 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS8Q8N3P4 CTAGE11P-201ENST00000451540 2353 ntBASIC10.4□□□□□ -0.74
VPS8Q8N3P4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC10.4□□□□□ -0.74
VPS8Q8N3P4 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS8Q8N3P4 AC138915.4-201ENST00000565549 4147 ntBASIC10.4□□□□□ -0.74
VPS8Q8N3P4 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VPS8Q8N3P4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VPS8Q8N3P4 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
VPS8Q8N3P4 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VPS8Q8N3P4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC10.4□□□□□ -0.75
VPS8Q8N3P4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC10.4□□□□□ -0.75
VPS8Q8N3P4 GAPDHP16-201ENST00000448152 962 ntBASIC10.4□□□□□ -0.75
VPS8Q8N3P4 RN7SL413P-201ENST00000482700 297 ntBASIC10.4□□□□□ -0.75
VPS8Q8N3P4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC10.4□□□□□ -0.75
VPS8Q8N3P4 NDUFB9P1-201ENST00000604683 510 ntBASIC10.4□□□□□ -0.75
VPS8Q8N3P4 AC012653.2-201ENST00000621880 420 ntBASIC10.4□□□□□ -0.75
VPS8Q8N3P4 AC114546.4-201ENST00000624413 369 ntBASIC10.4□□□□□ -0.75
VPS8Q8N3P4 AC007603.3-201ENST00000636915 979 ntBASIC10.4□□□□□ -0.75
VPS8Q8N3P4 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
VPS8Q8N3P4 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
VPS8Q8N3P4 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
VPS8Q8N3P4 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms