Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC233724.1-201ENST00000503894 233 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 NMNAT1P4-201ENST00000505598 840 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 GOLGA5P1-201ENST00000507317 980 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC112518.2-201ENST00000508565 425 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 GZMB-205ENST00000526004 819 ntTSL 3 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 FDPSP3-201ENST00000556903 1013 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC142086.3-201ENST00000563896 802 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC025283.1-201ENST00000572039 734 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 RN7SL664P-201ENST00000584239 305 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC073387.2-201ENST00000604797 784 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AP004247.4-201ENST00000608484 942 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 TUSC7.1-201ENST00000610969 165 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AL590240.3-201ENST00000621416 943 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC005609.2-201ENST00000623320 592 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC091931.1-201ENST00000623488 728 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC012557.3-201ENST00000626439 255 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 MAPK10-371ENST00000641952 5209 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC124045.1-201ENST00000606008 1953 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 THAP12P1-201ENST00000398672 2203 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 LINC02128-205ENST00000641755 1334 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 RNA5SP301-201ENST00000362537 121 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 SNORA71D-201ENST00000363484 134 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 RN7SKP50-201ENST00000364694 315 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 SNORD115-48-201ENST00000364764 76 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 YWHAZP3-201ENST00000415292 738 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC011233.1-201ENST00000422812 283 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AL139415.2-201ENST00000431968 163 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC123904.1-201ENST00000441072 368 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AL136455.1-201ENST00000441083 1240 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 RBMX2P4-201ENST00000441256 376 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC090954.1-201ENST00000445502 361 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 HMGB1P26-201ENST00000452520 628 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC020779.1-201ENST00000478757 796 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 RNU2-30P-201ENST00000516209 141 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 MTND6P19-201ENST00000519399 524 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC7.09□□□□□ -1.27
ATG4DQ86TL0 AP003174.3-201ENST00000537926 516 ntBASIC7.09□□□□□ -1.27
ATG4DQ86TL0 THAP2-202ENST00000547843 672 ntTSL 2 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms