Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MKI67P1-201ENST00000604297 1460 ntBASIC7.24□□□□□ -1.25
LHX1P48742 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.23□□□□□ -1.25
LHX1P48742 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.23□□□□□ -1.25
LHX1P48742 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
LHX1P48742 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 RN7SKP184-201ENST00000362348 333 ntBASIC7.23□□□□□ -1.25
LHX1P48742 RNU1-5P-201ENST00000362684 144 ntBASIC7.23□□□□□ -1.25
LHX1P48742 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.23□□□□□ -1.25
LHX1P48742 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
LHX1P48742 AL034417.1-201ENST00000399343 800 ntBASIC7.23□□□□□ -1.25
LHX1P48742 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.23□□□□□ -1.25
LHX1P48742 CDC42P6-201ENST00000421246 576 ntBASIC7.23□□□□□ -1.25
LHX1P48742 PSMC1P2-201ENST00000423961 1204 ntBASIC7.23□□□□□ -1.25
LHX1P48742 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.23□□□□□ -1.25
LHX1P48742 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 RPS3AP49-201ENST00000472161 790 ntBASIC7.23□□□□□ -1.25
LHX1P48742 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.23□□□□□ -1.25
LHX1P48742 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 RN7SL199P-201ENST00000578752 281 ntBASIC7.23□□□□□ -1.25
LHX1P48742 RN7SL656P-201ENST00000579044 281 ntBASIC7.23□□□□□ -1.25
LHX1P48742 RN7SL404P-201ENST00000582421 281 ntBASIC7.23□□□□□ -1.25
LHX1P48742 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.23□□□□□ -1.25
LHX1P48742 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.23□□□□□ -1.25
LHX1P48742 AC091768.1-201ENST00000609258 930 ntBASIC7.23□□□□□ -1.25
LHX1P48742 AC034229.6-201ENST00000623704 224 ntBASIC7.23□□□□□ -1.25
LHX1P48742 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 AC027559.1-201ENST00000636288 271 ntBASIC7.23□□□□□ -1.25
LHX1P48742 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.23□□□□□ -1.25
LHX1P48742 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.23□□□□□ -1.25
LHX1P48742 AC067942.1-201ENST00000488045 1493 ntBASIC7.23□□□□□ -1.25
LHX1P48742 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.23□□□□□ -1.25
LHX1P48742 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.23□□□□□ -1.25
LHX1P48742 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LHX1P48742 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
LHX1P48742 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 ZNF840P-201ENST00000504759 1996 ntBASIC7.22□□□□□ -1.25
LHX1P48742 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 AP003119.3-201ENST00000566747 4192 ntBASIC7.22□□□□□ -1.25
LHX1P48742 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.22□□□□□ -1.25
LHX1P48742 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
LHX1P48742 METTL5-202ENST00000308099 629 ntTSL 3 BASIC7.22□□□□□ -1.25
LHX1P48742 AC010894.1-201ENST00000313760 361 ntBASIC7.22□□□□□ -1.25
LHX1P48742 SNORA70.3-201ENST00000365075 132 ntBASIC7.22□□□□□ -1.25
LHX1P48742 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.22□□□□□ -1.25
LHX1P48742 SNORD94-201ENST00000386037 137 ntBASIC7.22□□□□□ -1.25
LHX1P48742 FDPSP5-201ENST00000399474 1057 ntBASIC7.22□□□□□ -1.25
LHX1P48742 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.22□□□□□ -1.25
LHX1P48742 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.22□□□□□ -1.25
LHX1P48742 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.22□□□□□ -1.25
LHX1P48742 CDK7P1-201ENST00000434574 693 ntBASIC7.22□□□□□ -1.25
LHX1P48742 PA2G4P1-201ENST00000442248 1197 ntBASIC7.22□□□□□ -1.25
LHX1P48742 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.22□□□□□ -1.25
LHX1P48742 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.22□□□□□ -1.25
LHX1P48742 AL445991.1-201ENST00000450381 475 ntBASIC7.22□□□□□ -1.25
LHX1P48742 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.22□□□□□ -1.25
LHX1P48742 AL034369.1-201ENST00000453808 477 ntBASIC7.22□□□□□ -1.25
LHX1P48742 RN7SL83P-201ENST00000468131 297 ntBASIC7.22□□□□□ -1.25
LHX1P48742 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.22□□□□□ -1.25
LHX1P48742 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LHX1P48742 RN7SL37P-201ENST00000490461 307 ntBASIC7.22□□□□□ -1.25
LHX1P48742 AC091849.1-201ENST00000509920 121 ntBASIC7.22□□□□□ -1.25
LHX1P48742 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.22□□□□□ -1.25
LHX1P48742 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.22□□□□□ -1.25
LHX1P48742 AC011352.2-201ENST00000514574 1016 ntBASIC7.22□□□□□ -1.25
LHX1P48742 AC122713.1-201ENST00000518368 1015 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms