Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.27□□□□□ -1.25
COL6A2P12110 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 AC074198.1-201ENST00000506546 1397 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC7.27□□□□□ -1.25
COL6A2P12110 OR4G1P-202ENST00000641173 1788 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 AC104581.5-201ENST00000624171 7141 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.27□□□□□ -1.25
COL6A2P12110 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.27□□□□□ -1.25
COL6A2P12110 AC110716.2-201ENST00000563865 3945 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
COL6A2P12110 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
COL6A2P12110 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL6A2P12110 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
COL6A2P12110 AL353625.1-202ENST00000366273 571 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL6A2P12110 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL6A2P12110 SNORA3.1-201ENST00000408166 111 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.26□□□□□ -1.25
COL6A2P12110 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.26□□□□□ -1.25
COL6A2P12110 IGLC6-201ENST00000410078 317 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.26□□□□□ -1.25
COL6A2P12110 CYP4F32P-201ENST00000426492 504 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.26□□□□□ -1.25
COL6A2P12110 HMGN2P24-201ENST00000433516 273 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL6A2P12110 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC7.26□□□□□ -1.25
COL6A2P12110 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.26□□□□□ -1.25
COL6A2P12110 Z83846.1-201ENST00000446798 265 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 OR7E102P-201ENST00000448855 1015 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.26□□□□□ -1.25
COL6A2P12110 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 AC069277.2-201ENST00000454211 432 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.26□□□□□ -1.25
COL6A2P12110 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.26□□□□□ -1.25
COL6A2P12110 AC010627.1-201ENST00000503819 1294 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC7.26□□□□□ -1.25
COL6A2P12110 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC7.26□□□□□ -1.25
COL6A2P12110 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.26□□□□□ -1.25
COL6A2P12110 AP001124.1-201ENST00000529628 385 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AC084851.2-201ENST00000530377 364 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 OR6M3P-201ENST00000531567 700 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 UBTFL9-201ENST00000534504 1148 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.26□□□□□ -1.25
COL6A2P12110 DCN-207ENST00000546370 586 ntTSL 3 BASIC7.26□□□□□ -1.25
COL6A2P12110 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC7.26□□□□□ -1.25
COL6A2P12110 ULK4P3-201ENST00000563895 440 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AC233266.2-201ENST00000567067 528 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC7.26□□□□□ -1.25
COL6A2P12110 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.26□□□□□ -1.25
COL6A2P12110 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.26□□□□□ -1.25
COL6A2P12110 RPL35AP25-201ENST00000584631 330 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC7.26□□□□□ -1.25
COL6A2P12110 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 AC022239.4-201ENST00000602626 504 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AC069431.2-201ENST00000604149 1099 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.26□□□□□ -1.25
COL6A2P12110 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL6A2P12110 AC025016.1-201ENST00000616746 682 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
COL6A2P12110 C18orf12-201ENST00000623329 537 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AC103703.1-201ENST00000634783 663 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AL590396.4-201ENST00000636779 956 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL6A2P12110 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL6A2P12110 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL6A2P12110 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL6A2P12110 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 KARSP2-201ENST00000415696 1639 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 TRIM60P14-201ENST00000513444 1419 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
COL6A2P12110 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.26□□□□□ -1.25
COL6A2P12110 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL6A2P12110 AL513523.1-201ENST00000417868 1309 ntBASIC7.26□□□□□ -1.25
COL6A2P12110 AL606490.2-201ENST00000457562 1330 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms