Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 FAM204BP-201ENST00000369171 701 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 TRAV35-201ENST00000390462 330 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC000089.1-201ENST00000424559 801 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC117395.2-201ENST00000463122 1128 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 UOX-201ENST00000471089 899 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 PGAM4P2-201ENST00000512491 721 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC093878.1-201ENST00000515630 432 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 HNRNPRP2-201ENST00000528421 743 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC023310.2-201ENST00000553844 547 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC011500.1-201ENST00000601963 469 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AP005131.7-201ENST00000610087 611 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 PCA3_2.1-201ENST00000612507 409 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AL356094.1-201ENST00000624663 1212 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AL132796.3-201ENST00000624703 900 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 HPVC1-201ENST00000629899 1198 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 THAP12P7-201ENST00000520248 2290 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC090181.3-201ENST00000624777 1514 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AC068733.2-201ENST00000605434 1418 ntBASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC187A0A096LP49 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 ZNF812P-201ENST00000457674 1694 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 OR7E25P-201ENST00000344844 931 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 SNORA40.4-201ENST00000390971 128 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AL359715.1-201ENST00000404330 555 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 RNA5SP155-201ENST00000411154 129 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AL138899.2-201ENST00000439139 499 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 NPM1P23-201ENST00000440193 849 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 RN7SKP70-201ENST00000516655 271 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 RNU6-467P-201ENST00000517027 110 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 IGKV2D-38-201ENST00000518423 240 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 EIF4A3P1-201ENST00000578499 647 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 MIR212-201ENST00000586026 110 ntBASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC187A0A096LP49 GMCL1P2-201ENST00000605230 823 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms