Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
RIMBP3Q9UFD9 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 GPI-202ENST00000415930 4000 ntTSL 2 BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 MIR550A3-201ENST00000390735 95 ntBASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 AL445238.1-204ENST00000400311 463 ntBASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 KHDC1P1-201ENST00000511053 508 ntBASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 AC040162.2-201ENST00000573092 157 ntBASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 COX6CP7-201ENST00000597056 208 ntBASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC10.4□□□□□ -0.75
RIMBP3Q9UFD9 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 USP40-202ENST00000409945 1946 ntTSL 2 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 AP000997.2-201ENST00000564619 8400 ntBASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 FAR2P2-201ENST00000413041 594 ntBASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 FAR2P4-202ENST00000425399 584 ntBASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 FAR2P1-206ENST00000449736 709 ntBASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 MIR6793-201ENST00000612376 63 ntBASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 ITIH6-201ENST00000218436 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 Z97989.1-201ENST00000531702 2421 ntBASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 ZNF304-202ENST00000391705 4313 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
RIMBP3Q9UFD9 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 CA10-204ENST00000570565 2276 ntTSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AC008753.1-201ENST00000423096 284 ntBASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AC234771.3-201ENST00000454984 622 ntBASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 HAUS8P1-201ENST00000549005 542 ntBASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 GNG2-208ENST00000554875 430 ntTSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 AC073046.2-201ENST00000604756 527 ntBASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 RPSAP73-201ENST00000614820 330 ntBASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 RACGAP1P-201ENST00000550663 1879 ntBASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
RIMBP3Q9UFD9 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 372.9 ms