Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 MKI67P1-201ENST00000604297 1460 ntBASIC8.3□□□□□ -1.08
UPF2Q9HAU5 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 AP002800.1-201ENST00000624982 2225 ntBASIC8.3□□□□□ -1.08
UPF2Q9HAU5 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC8.3□□□□□ -1.08
UPF2Q9HAU5 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 STAG3L4-201ENST00000352103 530 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 RNA5SP188-201ENST00000362916 129 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 AL359715.1-201ENST00000404330 555 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 HBBP1-201ENST00000433329 439 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 RPL21P33-201ENST00000444831 484 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 PYM1-204ENST00000454792 884 ntTSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 SULT1D1P-201ENST00000458020 882 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 RN7SL608P-201ENST00000492377 279 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 HNRNPA1P17-201ENST00000496620 924 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 AC026458.1-201ENST00000564330 438 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 AC018558.5-201ENST00000565840 952 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
UPF2Q9HAU5 AL117378.2-201ENST00000622916 1337 ntBASIC8.29□□□□□ -1.08
UPF2Q9HAU5 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 AC096992.2-201ENST00000609553 1684 ntBASIC8.28□□□□□ -1.08
UPF2Q9HAU5 AL451064.2-201ENST00000623514 1654 ntBASIC8.28□□□□□ -1.08
UPF2Q9HAU5 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 AL034372.1-201ENST00000407586 754 ntBASIC8.28□□□□□ -1.08
UPF2Q9HAU5 RN7SKP148-201ENST00000410179 275 ntBASIC8.28□□□□□ -1.08
UPF2Q9HAU5 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 RPL22P11-201ENST00000434894 385 ntBASIC8.28□□□□□ -1.08
UPF2Q9HAU5 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 RN7SL697P-201ENST00000582484 299 ntBASIC8.28□□□□□ -1.08
UPF2Q9HAU5 SIGLEC31P-201ENST00000594237 551 ntBASIC8.28□□□□□ -1.08
UPF2Q9HAU5 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
UPF2Q9HAU5 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms