Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL353803.3-201ENST00000444641 335 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 RN7SL160P-201ENST00000468558 284 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC068522.1-201ENST00000482895 345 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC010374.2-201ENST00000512933 535 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 MTND5P21-201ENST00000531961 522 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 OR7E2P-201ENST00000533071 889 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 OR5AH1P-201ENST00000595968 283 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AL390058.1-201ENST00000603834 629 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC087468.1-201ENST00000604365 630 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC023513.1-201ENST00000604396 691 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AL391834.2-201ENST00000609982 546 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 PTCHD3P1-201ENST00000612350 537 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC009032.1-201ENST00000617574 431 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AL353898.2-201ENST00000623000 255 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AL596275.2-208ENST00000641192 594 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AL157713.1-201ENST00000379752 1531 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 PRNCR1-201ENST00000635449 12727 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 MARK2P4-201ENST00000503381 2380 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC061975.5-201ENST00000584928 1441 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 NBPF8-201ENST00000583271 5330 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AL358913.2-201ENST00000553881 1548 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 SNORA72.3-201ENST00000365074 132 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 RNU6-925P-201ENST00000384629 104 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 PTMAP8-201ENST00000397729 342 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AL607077.1-201ENST00000401718 499 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 ARMC8P1-201ENST00000443069 1289 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 RN7SL251P-201ENST00000464175 297 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 RN7SL228P-201ENST00000470060 303 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC117383.2-201ENST00000514722 322 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC100854.1-201ENST00000520351 341 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 FXNP1-201ENST00000555153 337 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 RN7SL835P-201ENST00000579920 262 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms