Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AL022324.2-201ENST00000434827 780 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 RPL26P30-201ENST00000453533 435 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC099340.1-201ENST00000475247 599 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC122713.1-201ENST00000518368 1015 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC131935.1-201ENST00000524621 333 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC068408.1-201ENST00000577406 1144 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC011921.2-201ENST00000589465 152 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC005899.6-201ENST00000620729 297 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC073488.9-201ENST00000631601 754 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 LPAL2-203ENST00000454031 2498 ntBASIC9.76□□□□□ -0.85
SIN3AQ96ST3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 AC122713.2-201ENST00000624942 3335 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 RNA5SP65-201ENST00000363166 119 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 FDPSP5-201ENST00000399474 1057 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 CDC42P6-201ENST00000421246 576 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 EIF4A1P2-201ENST00000422633 1220 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 RN7SKP198-201ENST00000459286 306 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 RPL7AP23-201ENST00000482625 776 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 RN7SL37P-201ENST00000490461 307 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 RAB30-209ENST00000532548 644 ntTSL 3 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 HMGN1P26-201ENST00000558737 303 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 CCL2-202ENST00000580907 736 ntTSL 2 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 U91328.4-201ENST00000608919 517 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 OR1N1-202ENST00000619659 939 ntBASIC9.75□□□□□ -0.85
SIN3AQ96ST3 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SIN3AQ96ST3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 SNORA7A-201ENST00000384765 139 ntBASIC9.74□□□□□ -0.85
SIN3AQ96ST3 RPL31-202ENST00000409000 641 ntTSL 2 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 RPL23AP68-201ENST00000480924 445 ntBASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC9.74□□□□□ -0.85
SIN3AQ96ST3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms