Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC130448.2-201ENST00000624082 374 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 DDX43P1-201ENST00000510713 1763 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.86□□□□□ -1.15
CDK5RAP3Q96JB5 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 CDY19P-201ENST00000411668 1613 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 CDY18P-201ENST00000438294 1609 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 QRSL1P3-201ENST00000552666 1316 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 RNA5SP114-201ENST00000363780 113 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 RN7SKP38-201ENST00000410782 309 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 NFU1P1-201ENST00000413128 774 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 CHCHD3P1-201ENST00000425516 676 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 LSM3P3-201ENST00000436601 306 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 OSTCP2-201ENST00000437956 444 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 BTBD7P2-201ENST00000441962 620 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 PSMA6P2-201ENST00000457574 686 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AP001646.2-201ENST00000528645 1156 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC078878.1-201ENST00000539832 958 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC133552.4-201ENST00000576103 676 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AL353684.1-201ENST00000622677 1120 ntBASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CDK5RAP3Q96JB5 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC233968.1-201ENST00000611212 1300 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AL359715.1-201ENST00000404330 555 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 GAPDHP69-201ENST00000425504 1008 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 FECHP1-201ENST00000431896 1214 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 AC005517.1-201ENST00000452091 489 ntBASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.84□□□□□ -1.15
CDK5RAP3Q96JB5 GAPDHP53-201ENST00000458397 924 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms