Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 IGLJCOR18-201ENST00000584002 424 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 PRELID3BP3-201ENST00000584963 545 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 RPS4XP21-201ENST00000603814 750 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AL590032.1-201ENST00000604920 252 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 AC099654.11-201ENST00000638857 294 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
C9orf40Q8IXQ3 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC007993.1-201ENST00000621298 2430 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 RNA5SP382-201ENST00000363355 112 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC008753.1-201ENST00000423096 284 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 PTPN2P1-201ENST00000423212 1072 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AHCYP8-201ENST00000425108 209 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 E2F6P1-201ENST00000428850 745 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 RN7SL790P-201ENST00000474043 298 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 RN7SL267P-201ENST00000485107 261 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC096754.1-201ENST00000508904 818 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 OR9L1P-201ENST00000529493 933 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 DPPA3P2-201ENST00000553589 478 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC068408.1-201ENST00000577406 1144 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 MIR744-201ENST00000578242 98 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 U91328.4-201ENST00000608919 517 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC006328.2-201ENST00000623198 397 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC012005.2-201ENST00000624333 397 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AL596275.2-208ENST00000641192 594 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AP005139.1-201ENST00000580702 1647 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 ZNF806-201ENST00000438300 1774 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 AC092701.1-201ENST00000623627 1551 ntBASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
C9orf40Q8IXQ3 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC096992.2-201ENST00000609553 1684 ntBASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.3□□□□□ -1.4
C9orf40Q8IXQ3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms