Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NEK3P51956 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NEK3P51956 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.35□□□□□ -1.23
NEK3P51956 KYNUP2-201ENST00000582280 1329 ntBASIC7.35□□□□□ -1.23
NEK3P51956 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NEK3P51956 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NEK3P51956 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NEK3P51956 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.35□□□□□ -1.23
NEK3P51956 RNU4-81P-201ENST00000363561 144 ntBASIC7.35□□□□□ -1.23
NEK3P51956 RNA5SP442-201ENST00000365050 107 ntBASIC7.35□□□□□ -1.23
NEK3P51956 SNORA70.8-201ENST00000384231 136 ntBASIC7.35□□□□□ -1.23
NEK3P51956 MIR640-201ENST00000385086 96 ntBASIC7.35□□□□□ -1.23
NEK3P51956 RPS3AP5-201ENST00000389400 821 ntBASIC7.35□□□□□ -1.23
NEK3P51956 RNA5SP35-201ENST00000391257 129 ntBASIC7.35□□□□□ -1.23
NEK3P51956 AC007068.1-201ENST00000396690 844 ntBASIC7.35□□□□□ -1.23
NEK3P51956 SNORA11D-201ENST00000408548 128 ntBASIC7.35□□□□□ -1.23
NEK3P51956 SNORA11E-201ENST00000408778 128 ntBASIC7.35□□□□□ -1.23
NEK3P51956 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.35□□□□□ -1.23
NEK3P51956 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.35□□□□□ -1.23
NEK3P51956 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.35□□□□□ -1.23
NEK3P51956 ANXA2P2-201ENST00000435128 1020 ntBASIC7.35□□□□□ -1.23
NEK3P51956 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.35□□□□□ -1.23
NEK3P51956 RPS19P6-201ENST00000441327 433 ntBASIC7.35□□□□□ -1.23
NEK3P51956 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.35□□□□□ -1.23
NEK3P51956 RN7SL834P-201ENST00000461450 286 ntBASIC7.35□□□□□ -1.23
NEK3P51956 AF305872.1-201ENST00000485217 471 ntBASIC7.35□□□□□ -1.23
NEK3P51956 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.35□□□□□ -1.23
NEK3P51956 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.35□□□□□ -1.23
NEK3P51956 IGLV1-62-201ENST00000518003 441 ntBASIC7.35□□□□□ -1.23
NEK3P51956 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.35□□□□□ -1.23
NEK3P51956 SLC25A51P2-201ENST00000535708 889 ntBASIC7.35□□□□□ -1.23
NEK3P51956 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.35□□□□□ -1.23
NEK3P51956 AC126177.6-201ENST00000550420 1009 ntBASIC7.35□□□□□ -1.23
NEK3P51956 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.35□□□□□ -1.23
NEK3P51956 AC005520.3-201ENST00000602874 370 ntBASIC7.35□□□□□ -1.23
NEK3P51956 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.35□□□□□ -1.23
NEK3P51956 COX6CP16-201ENST00000603667 216 ntBASIC7.35□□□□□ -1.23
NEK3P51956 AC007347.2-201ENST00000623044 180 ntBASIC7.35□□□□□ -1.23
NEK3P51956 AC211433.3-201ENST00000623770 375 ntBASIC7.35□□□□□ -1.23
NEK3P51956 AC093909.6-201ENST00000624757 775 ntBASIC7.35□□□□□ -1.23
NEK3P51956 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.35□□□□□ -1.23
NEK3P51956 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.35□□□□□ -1.23
NEK3P51956 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NEK3P51956 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.35□□□□□ -1.23
NEK3P51956 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.35□□□□□ -1.23
NEK3P51956 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.35□□□□□ -1.23
NEK3P51956 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.35□□□□□ -1.23
NEK3P51956 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NEK3P51956 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NEK3P51956 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NEK3P51956 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NEK3P51956 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NEK3P51956 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC7.34□□□□□ -1.23
NEK3P51956 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.34□□□□□ -1.23
NEK3P51956 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
NEK3P51956 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.34□□□□□ -1.23
NEK3P51956 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NEK3P51956 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.34□□□□□ -1.23
NEK3P51956 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 OR2AH1P-202ENST00000641232 2744 ntBASIC7.34□□□□□ -1.23
NEK3P51956 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 FTO-203ENST00000460382 1517 ntTSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 RNU6-1331P-201ENST00000363658 106 ntBASIC7.34□□□□□ -1.23
NEK3P51956 MT-RNR1-201ENST00000389680 954 ntBASIC7.34□□□□□ -1.23
NEK3P51956 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.34□□□□□ -1.23
NEK3P51956 RN7SKP232-201ENST00000410170 290 ntBASIC7.34□□□□□ -1.23
NEK3P51956 AC098592.2-201ENST00000413158 265 ntBASIC7.34□□□□□ -1.23
NEK3P51956 AL359633.1-201ENST00000421403 310 ntBASIC7.34□□□□□ -1.23
NEK3P51956 RCC2P2-201ENST00000422174 918 ntBASIC7.34□□□□□ -1.23
NEK3P51956 AC009303.1-201ENST00000426307 352 ntBASIC7.34□□□□□ -1.23
NEK3P51956 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.34□□□□□ -1.23
NEK3P51956 RPL29P7-201ENST00000440227 457 ntBASIC7.34□□□□□ -1.23
NEK3P51956 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.34□□□□□ -1.23
NEK3P51956 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.34□□□□□ -1.23
NEK3P51956 AC040975.1-201ENST00000472104 316 ntBASIC7.34□□□□□ -1.23
NEK3P51956 RPL5P11-201ENST00000498068 893 ntBASIC7.34□□□□□ -1.23
NEK3P51956 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.34□□□□□ -1.23
NEK3P51956 AC008417.1-201ENST00000510014 565 ntBASIC7.34□□□□□ -1.23
NEK3P51956 SUMO2P7-201ENST00000511179 285 ntBASIC7.34□□□□□ -1.23
NEK3P51956 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 OR4A1P-201ENST00000532342 920 ntBASIC7.34□□□□□ -1.23
NEK3P51956 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEK3P51956 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.34□□□□□ -1.23
NEK3P51956 AC093524.1-201ENST00000564266 1094 ntBASIC7.34□□□□□ -1.23
NEK3P51956 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.34□□□□□ -1.23
NEK3P51956 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.34□□□□□ -1.23
NEK3P51956 GTF2IP6-201ENST00000583143 541 ntBASIC7.34□□□□□ -1.23
NEK3P51956 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.34□□□□□ -1.23
NEK3P51956 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms