Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
RB1P06400 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RB1P06400 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RB1P06400 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
RB1P06400 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RB1P06400 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RB1P06400 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 AP002364.1-201ENST00000623330 3386 ntBASIC7.39□□□□□ -1.23
RB1P06400 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.39□□□□□ -1.23
RB1P06400 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
RB1P06400 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.39□□□□□ -1.23
RB1P06400 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 AC129502.1-201ENST00000623261 1654 ntBASIC7.39□□□□□ -1.23
RB1P06400 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
RB1P06400 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 RN7SKP237-201ENST00000364663 301 ntBASIC7.39□□□□□ -1.23
RB1P06400 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.39□□□□□ -1.23
RB1P06400 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RB1P06400 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.39□□□□□ -1.23
RB1P06400 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.39□□□□□ -1.23
RB1P06400 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.39□□□□□ -1.23
RB1P06400 GPN3P1-201ENST00000423883 535 ntBASIC7.39□□□□□ -1.23
RB1P06400 AL645939.3-201ENST00000435408 225 ntBASIC7.39□□□□□ -1.23
RB1P06400 LSM3P3-201ENST00000436601 306 ntBASIC7.39□□□□□ -1.23
RB1P06400 EIF5AP4-201ENST00000441206 465 ntBASIC7.39□□□□□ -1.23
RB1P06400 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.39□□□□□ -1.23
RB1P06400 OR51P1P-201ENST00000447547 942 ntBASIC7.39□□□□□ -1.23
RB1P06400 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.39□□□□□ -1.23
RB1P06400 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.39□□□□□ -1.23
RB1P06400 RN7SL379P-201ENST00000479912 293 ntBASIC7.39□□□□□ -1.23
RB1P06400 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.39□□□□□ -1.23
RB1P06400 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 AC124891.1-201ENST00000536322 519 ntBASIC7.39□□□□□ -1.23
RB1P06400 MIR6071-201ENST00000616741 78 ntBASIC7.39□□□□□ -1.23
RB1P06400 AL390882.1-201ENST00000618821 594 ntBASIC7.39□□□□□ -1.23
RB1P06400 AC009950.2-201ENST00000636548 183 ntBASIC7.39□□□□□ -1.23
RB1P06400 AC010325.3-201ENST00000641084 394 ntBASIC7.39□□□□□ -1.23
RB1P06400 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RB1P06400 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.39□□□□□ -1.23
RB1P06400 AP003486.1-201ENST00000525716 3994 ntBASIC7.39□□□□□ -1.23
RB1P06400 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
RB1P06400 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.39□□□□□ -1.23
RB1P06400 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RB1P06400 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RB1P06400 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
RB1P06400 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.38□□□□□ -1.23
RB1P06400 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 AL358913.2-201ENST00000553881 1548 ntBASIC7.38□□□□□ -1.23
RB1P06400 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.38□□□□□ -1.23
RB1P06400 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RB1P06400 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.38□□□□□ -1.23
RB1P06400 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
RB1P06400 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.38□□□□□ -1.23
RB1P06400 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.38□□□□□ -1.23
RB1P06400 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.38□□□□□ -1.23
RB1P06400 RNA5SP140-201ENST00000364524 92 ntBASIC7.38□□□□□ -1.23
RB1P06400 RNA5SP122-201ENST00000384457 108 ntBASIC7.38□□□□□ -1.23
RB1P06400 RPL24P7-201ENST00000399435 453 ntBASIC7.38□□□□□ -1.23
RB1P06400 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RB1P06400 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 RNA5SP115-201ENST00000411160 107 ntBASIC7.38□□□□□ -1.23
RB1P06400 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.38□□□□□ -1.23
RB1P06400 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.38□□□□□ -1.23
RB1P06400 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.38□□□□□ -1.23
RB1P06400 SNRPBP1-201ENST00000443634 282 ntBASIC7.38□□□□□ -1.23
RB1P06400 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.38□□□□□ -1.23
RB1P06400 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.38□□□□□ -1.23
RB1P06400 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.38□□□□□ -1.23
RB1P06400 AC066616.1-201ENST00000486795 413 ntBASIC7.38□□□□□ -1.23
RB1P06400 AC120036.3-201ENST00000517826 292 ntBASIC7.38□□□□□ -1.23
RB1P06400 AC018992.1-201ENST00000523778 2149 ntBASIC7.38□□□□□ -1.23
RB1P06400 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RB1P06400 ACTG1P15-201ENST00000570019 1063 ntBASIC7.38□□□□□ -1.23
RB1P06400 OR1E3-201ENST00000575608 948 ntBASIC7.38□□□□□ -1.23
RB1P06400 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.38□□□□□ -1.23
RB1P06400 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.38□□□□□ -1.23
RB1P06400 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.38□□□□□ -1.23
RB1P06400 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.38□□□□□ -1.23
RB1P06400 MIR7854-201ENST00000620068 65 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms