Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC068408.1-201ENST00000577406 1144 ntBASIC7.8□□□□□ -1.16
CCDC66A2RUB6 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC010719.1-201ENST00000602992 747 ntBASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AL671309.1-201ENST00000603750 544 ntBASIC7.8□□□□□ -1.16
CCDC66A2RUB6 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 U47924.1-201ENST00000606539 434 ntBASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC097504.2-201ENST00000608088 454 ntBASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC239600.2-201ENST00000619615 1165 ntBASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC012254.5-201ENST00000623573 478 ntBASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC090099.1-204ENST00000623626 849 ntBASIC7.8□□□□□ -1.16
CCDC66A2RUB6 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 AC022034.1-201ENST00000512867 2156 ntBASIC7.8□□□□□ -1.16
CCDC66A2RUB6 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC66A2RUB6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 SLC9B1P3-201ENST00000452667 1334 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 EEF1A1P15-201ENST00000395772 1408 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 WNK1-220ENST00000574564 1401 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 MTATP6P31-201ENST00000406985 692 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 IGLC6-201ENST00000410078 317 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 RPL5P28-201ENST00000418634 693 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 RPL23AP34-201ENST00000423483 410 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC109454.1-201ENST00000471205 498 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 PGBD4P1-201ENST00000473644 407 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 MIR5095-201ENST00000578844 88 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 NPM1P45-201ENST00000583151 559 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 OR1AB1P-201ENST00000585564 761 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC007136.1-201ENST00000589141 199 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 OR7A11P-201ENST00000597719 953 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC063944.3-201ENST00000609969 533 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC080112.3-201ENST00000612552 880 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 RN7SL820P-201ENST00000616437 299 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 MIR6807-201ENST00000621968 92 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 AC073862.4-201ENST00000622982 854 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.79□□□□□ -1.16
CCDC66A2RUB6 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC66A2RUB6 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.78□□□□□ -1.16
CCDC66A2RUB6 AC079248.1-201ENST00000427568 1546 ntBASIC7.78□□□□□ -1.16
CCDC66A2RUB6 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC66A2RUB6 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
CCDC66A2RUB6 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.78□□□□□ -1.16
CCDC66A2RUB6 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC66A2RUB6 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.78□□□□□ -1.16
CCDC66A2RUB6 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CCDC66A2RUB6 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC66A2RUB6 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CCDC66A2RUB6 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
CCDC66A2RUB6 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms