Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC094019.1-201ENST00000434678 472 ntBASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 BNIP3P22-201ENST00000593399 556 ntBASIC6.36□□□□□ -1.39
CHD8Q9HCK8 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AL359976.1-201ENST00000418655 3528 ntBASIC6.36□□□□□ -1.39
CHD8Q9HCK8 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 HFE-207ENST00000357618 5286 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 RNA5SP477-201ENST00000362639 119 ntBASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 VN1R66P-201ENST00000412929 916 ntBASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 SYPL1P2-201ENST00000582878 727 ntBASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AC091544.5-201ENST00000620192 3815 ntBASIC6.36□□□□□ -1.39
CHD8Q9HCK8 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 RNA5SP346-201ENST00000363541 121 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AL020997.1-201ENST00000446554 349 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 CFL1P4-201ENST00000451536 498 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC013787.1-201ENST00000460165 307 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 KHDC1P1-201ENST00000511053 508 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 SUMO2P15-201ENST00000604285 278 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC073389.3-201ENST00000609434 935 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC004801.6-201ENST00000616571 978 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 MIR7854-201ENST00000620068 65 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AL355377.1-201ENST00000621125 1653 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 RNU1-19P-201ENST00000363306 165 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 SNX18P24-201ENST00000505249 671 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 SNX18P23-201ENST00000510867 677 ntBASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms